263944 FH2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263944 chr_12 FH2 superfamily 996552 998012 + FH2 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443202 Thaps263944.2, Thaps263944.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0200

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0039
 0.52

Most Highly Correlated Transcripts

263610

COG3899
0.8603

263599

COG3899
0.8466

13427

AarF
0.8229

11261

WD40 superfamily
0.8227

6400

hypothetical protein
0.8218

5788

TFIIS_M
0.8198

23130

NT_PAP_TUTase
0.8196

263483

CHD
0.819

34505

hypothetical protein
0.8162

264023

RabGAP-TBC
0.8158

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FH2 superfamily Formin Homology 2 Domain; Formin Homology 2 Domain. - 190.57 1.24E-55 81 - 390 superfamily 268111
DUF2360 superfamily Predicted coiled-coil domain-containing protein (DUF2360); This is the conserved 140 amino acid... - 59.7215 7.06E-11 24 - 55 superfamily 255793

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003779 GO:0016043 -

GO:0003779

actin binding

Details: 
Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
GO Category: 
MF

GO:0016043

cellular component organization

Details: 
A process that results in the assembly, arrangement of constituent parts, or disassembly of a cellular component.
GO Category: 
BP

Add comment

Log in to post comments