31930 (ftsH) FtsH_fam
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
31930 chr_2 (ftsH) FtsH_fam 2130748 2132873 + FtsH_fam
NCBI ID Ensembl Genomes exon ID
7452510 Thaps31930.1, Thaps31930.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0016
Normalized Mean Residue
Thaps_bicluster_0125
0.41
LPLAT_GPAT
0.8626
(bd1778) COG2329
0.8594
(Hlip2) high light induced protein 2
0.858
ThylakoidFormat superfamily
0.8415
DUF4079
0.8398
hypothetical protein
0.8341
VDE superfamily
0.8331
Kua-UEV1_localn superfamily
0.827
SDR_a5
0.8254
PRK05444
0.8237
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 99.9131 3.06E-24 195 - 361 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 99.9131 3.06E-24 195 - 361 superfamily 267297
Peptidase_M41 superfamily Peptidase family M41; Peptidase family M41. - 249.82 2.68E-78 443 - 638 superfamily 250619
FtsH_fam ATP-dependent metalloprotease FtsH; HflB(FtsH) is a pleiotropic protein required for correct cell... - 695.571 0 137 - 641 multi-dom 233327
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 212897 261285 Not available Not available AT5G42270.1 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0004222 GO:0005524 GO:0006508 GO:0004176 GO:0004252 GO:0000166 GO:0017111 GO:0016020 GO:0030163 GO:0008270 GO:0016021 GO:0004249 GO:0008133 GO:0008319 GO:0030402 -

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

ATP-dependent peptidase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the hydrolysis of peptide bonds.
GO Category: 
MF

serine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO Category: 
MF

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
GO Category: 
BP

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA
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