6656 PROCN
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6656 chr_7 PROCN 135160 140270 + PROCN

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0259

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0012
 0.49

Most Highly Correlated Transcripts

5776

PROCN superfamily
0.9143

5777

PRO8NT
0.8768

992

hypothetical protein
0.8544

264869

HELICc
0.8531

11434

hypothetical protein
0.8503

990

hypothetical protein
0.8469

2941

hypothetical protein
0.8445

17271

FtsJ
0.8428

6657

hypothetical protein
0.8419

12982

AAA superfamily
0.8405

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PROCN superfamily PROCN (NUC071) domain; The PROCN domain is the central domain in pre-mRNA splicing factors of PRO8... - 624.448 0 535 - 944 superfamily 116688
PROCN superfamily PROCN (NUC071) domain; The PROCN domain is the central domain in pre-mRNA splicing factors of PRO8... - 624.448 0 535 - 944 superfamily 116688
MPN superfamily Mpr1p, Pad1p N-terminal (MPN) domains; MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+) domains... - 187.449 7.88E-53 1315 - 1418 superfamily 265414
RNase_H_like superfamily Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of... - 93.5652 1.06E-20 1221 - 1267 superfamily 265450

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_19982 PHATRDRAFT_19982 168318 319191 Not available Cre01.g016050.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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