ThpsCt002 (trnR(ccg)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt002	chloroplast	(trnR(ccg))	6474	6626	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524788	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0255

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0007	0.40	0.00084 2400

Most Highly Correlated Transcripts

bd1039 (bd1039) psbV 0.9536	bd2088 (bd2088) rbcL 0.8995	bd1290 (bd1290) atpH 0.8974	bd1378 (bd1378) atpI 0.8868	bd467 (bd467) Cytochrome_b_N 0.8864	bd1192 (bd1192) Acyl_ACP_Desat 0.8854
bd794 (bd794) NA 0.8761	bd598 (bd598) atpG 0.8722	bd1441 (bd1441) ccsA 0.8654	bd1318 (bd1318) atpF 0.8645

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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