ThpsCt008 (trnI(cau)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt008	chloroplast	(trnI(cau))	49636	49708	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524776	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0255

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0009	0.42	0.000093 390000

Most Highly Correlated Transcripts

ThpsCt009 (trnS(gcu)) 0.9462	bd1290 (bd1290) atpH 0.8983	bd1378 (bd1378) atpI 0.8901	bd598 (bd598) atpG 0.887	bd794 (bd794) NA 0.8866	bd1192 (bd1192) Acyl_ACP_Desat 0.8788
bd1318 (bd1318) atpF 0.8718	bd1039 (bd1039) psbV 0.8709	ThpsCt004 (trnR(ucu)) 0.86	bd1023 (bd1023) atpD 0.8591

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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