20932 EEP superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20932	chr_1	EEP superfamily	2075333	2076893	-	EEP superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445513	Thaps20932.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0292

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0196	0.36	0.00000075 0.45

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9882	13308 PLN02948 0.8411	bd74 (bd74) T6A_YgjD 0.8386	13378 PRK13762 0.8218	42533 N2227 superfamily 0.8195	22296 hypothetical protein 0.8188
267979 HCO3_cotransp superfamily 0.8184	37156 PLN02369 0.816	3305 hypothetical protein 0.8123	5007 hypothetical protein 0.8118

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EEP superfamily		Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; This large superfamily includes the...	-	83.5065	6.75E-18	315 - 508	superfamily	260458

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44427	PHATRDRAFT_44427	180487	Not available	469141	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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