Module 156 Residual: 0.52

Title Bicluster Model Residual Score
bicluster_0156 v02 0.52 -9.02
Displaying 1 - 13 of 13
Rv0307c

Details for Rv0307c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.63 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0307c

Tuberculist Genomic Region

Rv0597c ATPase

Details for Rv0597c - ATPase

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.59 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0597c

Tuberculist Genomic Region

Rv0811c Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress

Details for Rv0811c - Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress

GO Terms: GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.09 | In vivo Essential: NA

Go to Gene Page: Rv0811c

Tuberculist Genomic Region

Rv1084 Thymidylate kinase (EC 2.7.4.9)

Details for Rv1084 - Thymidylate kinase (EC 2.7.4.9)

GO Terms: GO:0004798

PATRIC Pathways: Pyrimidine metabolism

Essentiality: Griffin Essential: 0.96 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1084

Tuberculist Genomic Region

Rv1239c Magnesium and cobalt transport protein CorA

Details for Rv1239c - Magnesium and cobalt transport protein CorA

GO Terms: GO:0005887

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.96 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1239c

Tuberculist Genomic Region

Rv1861 Possible membrane protein

Details for Rv1861 - Possible membrane protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.12 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1861

Tuberculist Genomic Region

Rv1862 Alcohol dehydrogenase (EC 1.1.1.1)

Details for Rv1862 - Alcohol dehydrogenase (EC 1.1.1.1)

GO Terms: NA

PATRIC Pathways: Glycine, serine and threonine metabolism, Naphthalene and anthracene degradation, Metabolism of xenobiotics by cytochrome P450, Retinol metabolism, Glycolysis / Gluconeogenesis, Drug metabolism - cytochrome P450, Tetrachloroethene degradation, Fatty acid metabolism, Tyrosine metabolism

Essentiality: Griffin Essential: 0.98 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1862

Tuberculist Genomic Region

Rv2281 Probable low-affinity inorganic phosphate transporter

Details for Rv2281 - Probable low-affinity inorganic phosphate transporter

GO Terms: GO:0006817, GO:0005315, GO:0016020

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.19 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2281

Tuberculist Genomic Region

Rv3139 Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Details for Rv3139 - Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

GO Terms: GO:0005618, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.52 | In vitro Essential: 0.12 | In vivo Essential: NA

Go to Gene Page: Rv3139

Tuberculist Genomic Region

Rv3140 Probable acyl-CoA dehydrogenase (EC 1.3.99.3)

Details for Rv3140 - Probable acyl-CoA dehydrogenase (EC 1.3.99.3)

GO Terms: GO:0003995, GO:0005886, GO:0040007

PATRIC Pathways: Fatty acid metabolism, Valine, leucine and isoleucine degradation, beta-Alanine metabolism, Propanoate metabolism

Essentiality: Griffin Essential: 0.08 | In vitro Essential: 0.06 | In vivo Essential: NA

Go to Gene Page: Rv3140

Tuberculist Genomic Region

Rv2115c Bacterial proteasome-activating AAA-ATPase (PAN)

Details for Rv2115c - Bacterial proteasome-activating AAA-ATPase (PAN)

GO Terms: GO:0005515, GO:0005886, GO:0010498, GO:0016887, GO:0051260, GO:0051409

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2115c

Tuberculist Genomic Region

Rv2116 Probable conserved lipoprotein lppK

Details for Rv2116 - Probable conserved lipoprotein lppK

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2116

Tuberculist Genomic Region

Rv2117 YlxP-like protein

Details for Rv2117 - YlxP-like protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.53 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2117

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 180 e-value: 890
Displaying 1 - 1 of 1
COG0714: MoxR-like ATPases
regulates 31 modules
Weight: 
0.18
up-regulates
ESX-1 secreted protein regulator EspR
regulates 8 modules
Weight: 
0.16
up-regulates
Transcriptional regulator, AsnC family
regulates 7 modules
Weight: 
0.16
up-regulates
Transcriptional regulator, TetR family
regulates 9 modules
Weight: 
0.10
up-regulates
Transcription regulator in CO-DH cluster
regulates 15 modules
Weight: 
0.10
up-regulates
Transcriptional regulator, TetR family
regulates 19 modules
Weight: 
0.08
up-regulates
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 15 of 15
GO:0005886 |

plasma membrane

GO:0040007 |

growth

GO:0004798 |

thymidylate kinase activity

GO:0005887 |

integral to plasma membrane

GO:0006817 |

phosphate ion transport

GO:0005315 |

inorganic phosphate transmembrane transporter activity

GO:0016020 |

membrane

GO:0005618 |

cell wall

GO:0003995 |

acyl-CoA dehydrogenase activity

GO:0005515 |

protein binding

GO:0010498 |

proteasomal protein catabolic process

GO:0016887 |

ATPase activity

GO:0051260 |

protein homooligomerization

GO:0051409 |

response to nitrosative stress