Rv0691c Mycofactocin system transcriptional regulator

Rv0691c (Mycofactocin system transcriptional regulator) is predicted to be co-regulated in modules bicluster_0386 with residual 0.48 and bicluster_0486 with residual 0.55.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.11 and 1,000.00 for bicluster_0386 and 500.00 and 840.00 for bicluster_0486 respectively.

These modules are enriched for following go terms: DNA binding, nucleic acid binding.

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 61 - 70 of 113
Gene Target Differential Expression Distance Expression pvalue Type
PE family protein
No -62 -0.52 0.999588 Primary.TSS
Drugs-transport transmembrane ATP-binding protein ABC transporter
No -79 0.13 0.999588 CDS
COG0028: Thiamine pyrophosphate-requiring enzymes
No -150 0.06 0.999588 Primary.TSS
No -81 0.18 0.999588 Primary.TSS
Phosphoenolpyruvate synthase (EC 2.7.9.2)
No -19 -0.15 0.999588 Primary.TSS
L-lactate dehydrogenase (EC 1.1.2.3)
No -48 0.08 0.999588 Primary.TSS
Probable short-chain type dehydrogenase/reductase (EC 1.1.-.-)
No -132 -0.08 0.999588 Primary.TSS
No -125 -0.01 0.999588 CDS
No 58 -0.1 0.999588 CDS
Probable carboxylesterase LipT (EC 3.1.1.-)
No 41 -0.21 0.999588 Internal.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 15.13 U
D3I 3 3 3.83 15.03 I
D3U 3 3 3.83 15.34 U
D5I 9 5 6.00 14.07 I
D5U 17 5 6.00 14.28 U
D7I 18 7 8.14 14.39 I
D7U 19 7 8.14 14.80 U
D14I 4 14 15.63 13.68 I
D14U 4 14 15.63 14.08 U
D17I 3 17 19.15 12.34 I
D17U 3 17 19.15 13.49 U
D21I 4 21 23.23 11.83 I
D21U 4 21 23.23 13.41 U
D24I 3 24 26.60 10.46 I
D24U 3 24 26.60 12.62 U
D28I 4 28 30.61 10.15 I
D28U 4 28 30.61 12.38 U