Rv2011c Transcriptional regulator, MarR family

Rv2011c (Transcriptional regulator, MarR family) is predicted to be co-regulated in modules bicluster_0291 with residual 0.49 and bicluster_0346 with residual 0.51.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 3.30 for bicluster_0291 and 0.00 and 0.14 for bicluster_0346 respectively.

These modules are enriched for following go terms: acyl-CoA dehydrogenase activity .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 41 - 50 of 79
Gene Target Differential Expression Distance Expression pvalue Type
ESAT-6-like protein EsxK
No 9 0.28 0.656041 Primary.TSS
No -44 -0.06 0.643346 Antisense.TSS
No -30 -0.06 0.643346 CDS
Putative secreted protein
Repressed 49 -1.26 0.000000000898 Primary.TSS
No 13 -0.17 0.727601 Primary.TSS
DNA-binding protein, CopG family
No 13 -0.28 0.616139 Internal.TSS
DNA-binding protein, CopG family
No -11 -0.28 0.616139 CDS
No -102 -0.43 0.0899385 Antisense.TSS
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)
Repressed -1 -1.22 0.00000000000712 CDS
Long-chain fatty-acid-CoA ligase (EC 6.2.1.3), Mycobacterial subgroup FadD22
No -85 0.26 0.571795 CDS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 14.56 U
D3I 3 3 3.83 14.66 I
D3U 3 3 3.83 14.70 U
D5I 9 5 6.00 13.66 I
D5U 17 5 6.00 13.47 U
D7I 18 7 8.14 14.54 I
D7U 19 7 8.14 14.34 U
D14I 4 14 15.63 12.53 I
D14U 4 14 15.63 13.70 U
D17I 3 17 19.15 9.92 I
D17U 3 17 19.15 12.91 U
D21I 4 21 23.23 9.25 I
D21U 4 21 23.23 13.12 U
D24I 3 24 26.60 6.46 I
D24U 3 24 26.60 12.29 U
D28I 4 28 30.61 6.92 I
D28U 4 28 30.61 12.27 U