Rv2011c Transcriptional regulator, MarR family

Rv2011c (Transcriptional regulator, MarR family) is predicted to be co-regulated in modules bicluster_0291 with residual 0.49 and bicluster_0346 with residual 0.51.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 3.30 for bicluster_0291 and 0.00 and 0.14 for bicluster_0346 respectively.

These modules are enriched for following go terms: acyl-CoA dehydrogenase activity .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 31 - 40 of 79
Gene Target Differential Expression Distance Expression pvalue Type
Antitoxin 1
No 4 -0.46 0.413495 Primary.TSS
ESAT-6-like protein EsxL
No 21 0.16 0.821407 Primary.TSS
Transcriptional regulator, BlaI family
No -42 -0.56 0.0119001 Primary.TSS
Lipoprotein LppE
Repressed 5 -0.75 0.00533164 CDS
Sialic acid-transport integral membrane protein NanT
No 25 0.08 0.776901 Antisense.TSS
Transcriptional regulator, MarR family
Induced 32 4.72 0 CDS
Repressed -9 -1.37 0.00328171 CDS
FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria
No 9 -0.5 0.000916438 Primary.TSS
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)
No -31 0.01 0.966178 CDS
Glycerate kinase (EC 2.7.1.31)
No -72 0.17 0.485236 Internal.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 14.56 U
D3I 3 3 3.83 14.66 I
D3U 3 3 3.83 14.70 U
D5I 9 5 6.00 13.66 I
D5U 17 5 6.00 13.47 U
D7I 18 7 8.14 14.54 I
D7U 19 7 8.14 14.34 U
D14I 4 14 15.63 12.53 I
D14U 4 14 15.63 13.70 U
D17I 3 17 19.15 9.92 I
D17U 3 17 19.15 12.91 U
D21I 4 21 23.23 9.25 I
D21U 4 21 23.23 13.12 U
D24I 3 24 26.60 6.46 I
D24U 3 24 26.60 12.29 U
D28I 4 28 30.61 6.92 I
D28U 4 28 30.61 12.27 U