Rv2011c Transcriptional regulator, MarR family

Rv2011c (Transcriptional regulator, MarR family) is predicted to be co-regulated in modules bicluster_0291 with residual 0.49 and bicluster_0346 with residual 0.51.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 3.30 for bicluster_0291 and 0.00 and 0.14 for bicluster_0346 respectively.

These modules are enriched for following go terms: acyl-CoA dehydrogenase activity .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 71 - 79 of 79
Gene Target Differential Expression Distance Expression pvalue Type
Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)
No -40 -0.34 0.174785 CDS
No -11 0.03 0.911485 CDS
Mobile element protein
No -83 0.12 0.348717 CDS
Cysteine synthase (EC 2.5.1.47)
No -10 -0.47 0.00000913 Antisense.TSS
PE family protein
Induced 15 1.09 0.000260013 Primary.TSS
No -124 -0.1 0.868087 Primary.TSS
PROBABLE CONSERVED TRANSMEMBRANE PROTEIN
No -14 -0.48 0.00217232 Primary.TSS
10 kDa culture filtrate antigen CFP-10 (EsxB)
No -40 0.09 0.909583 Primary.TSS
RD1 region associated protein Rv3876
No 21 0.08 0.746559 Antisense.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 14.56 U
D3I 3 3 3.83 14.66 I
D3U 3 3 3.83 14.70 U
D5I 9 5 6.00 13.66 I
D5U 17 5 6.00 13.47 U
D7I 18 7 8.14 14.54 I
D7U 19 7 8.14 14.34 U
D14I 4 14 15.63 12.53 I
D14U 4 14 15.63 13.70 U
D17I 3 17 19.15 9.92 I
D17U 3 17 19.15 12.91 U
D21I 4 21 23.23 9.25 I
D21U 4 21 23.23 13.12 U
D24I 3 24 26.60 6.46 I
D24U 3 24 26.60 12.29 U
D28I 4 28 30.61 6.92 I
D28U 4 28 30.61 12.27 U