Rv2011c Transcriptional regulator, MarR family

Rv2011c (Transcriptional regulator, MarR family) is predicted to be co-regulated in modules bicluster_0291 with residual 0.49 and bicluster_0346 with residual 0.51.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 3.30 for bicluster_0291 and 0.00 and 0.14 for bicluster_0346 respectively.

These modules are enriched for following go terms: acyl-CoA dehydrogenase activity .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 11 - 20 of 79
Gene Target Differential Expression Distance Expression pvalue Type
Translation elongation factor G
No 70 -0.05 0.866458 CDS
Mycofactocin system transcriptional regulator
No 33 -0.58 0.0561648 CDS
Mycofactocin system small protein
Repressed -14 -1.12 0.0000477 Primary.TSS
Possible protease IV SppA (endopeptidase IV) (signal peptide peptidase)
No 53 -0.36 0.00945732 Primary.TSS
No -61 -0.16 0.728526 CDS
Preprotein translocase secY subunit (TC 3.A.5.1.1)
No -137 0.01 0.981285 Primary.TSS
No -148 -0.46 0.00607255 Primary.TSS
DNA-binding response regulator
Repressed -16 -1.46 6.04e-16 Primary.TSS
Gamma-glutamyltranspeptidase (EC 2.3.2.2)
Repressed 41 -2.14 0 Internal.TSS
Gamma-glutamyltranspeptidase (EC 2.3.2.2)
Repressed 29 -2.14 0 CDS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 14.56 U
D3I 3 3 3.83 14.66 I
D3U 3 3 3.83 14.70 U
D5I 9 5 6.00 13.66 I
D5U 17 5 6.00 13.47 U
D7I 18 7 8.14 14.54 I
D7U 19 7 8.14 14.34 U
D14I 4 14 15.63 12.53 I
D14U 4 14 15.63 13.70 U
D17I 3 17 19.15 9.92 I
D17U 3 17 19.15 12.91 U
D21I 4 21 23.23 9.25 I
D21U 4 21 23.23 13.12 U
D24I 3 24 26.60 6.46 I
D24U 3 24 26.60 12.29 U
D28I 4 28 30.61 6.92 I
D28U 4 28 30.61 12.27 U