Rv2011c Transcriptional regulator, MarR family

Rv2011c (Transcriptional regulator, MarR family) is predicted to be co-regulated in modules bicluster_0291 with residual 0.49 and bicluster_0346 with residual 0.51.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 3.30 for bicluster_0291 and 0.00 and 0.14 for bicluster_0346 respectively.

These modules are enriched for following go terms: acyl-CoA dehydrogenase activity .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 21 - 30 of 79
Gene Target Differential Expression Distance Expression pvalue Type
cyclic nucleotide-binding protein
No 10 -0.17 0.653572 CDS
No -18 -0.18 0.748463 Primary.TSS
N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB
No -13 0.11 0.777002 Internal.TSS
Regulator of polyketide synthase expression
Repressed 64 -1 0.0000021 Primary.TSS
Maltose/maltodextrin ABC transporter, permease protein MalG
No -44 -0.05 0.923531 Internal.TSS
Glutamate racemase (EC 5.1.1.3)
No -79 -0.55 0.0141878 Primary.TSS
DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)
No -77 -0.22 0.487245 Primary.TSS
Methylmalonyl-CoA mutase (EC 5.4.99.2)
No -46 -0.29 0.454631 CDS
metallo-beta-lactamase superfamily protein
No -105 -0.06 0.841973 CDS
FIG011178: rRNA methylase
No 29 -0.11 0.842115 CDS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 14.56 U
D3I 3 3 3.83 14.66 I
D3U 3 3 3.83 14.70 U
D5I 9 5 6.00 13.66 I
D5U 17 5 6.00 13.47 U
D7I 18 7 8.14 14.54 I
D7U 19 7 8.14 14.34 U
D14I 4 14 15.63 12.53 I
D14U 4 14 15.63 13.70 U
D17I 3 17 19.15 9.92 I
D17U 3 17 19.15 12.91 U
D21I 4 21 23.23 9.25 I
D21U 4 21 23.23 13.12 U
D24I 3 24 26.60 6.46 I
D24U 3 24 26.60 12.29 U
D28I 4 28 30.61 6.92 I
D28U 4 28 30.61 12.27 U