Organism : Bacillus subtilis | Module List :
Regulation information for BSU18710(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BSU18710
|Gene||Common Name||Description||Module membership|
|BSU01550||gerD||lipoprotein with a role in spores' rapid response to nutrient germinants (RefSeq)||55, 217|
|BSU02600||cwlJ||cell wall hydrolase (RefSeq)||55, 127|
|BSU02710||yczC||putative integral inner membrane protein (RefSeq)||96, 307|
|BSU03110||ycgH||putative amino acid transporter (RefSeq)||96, 156|
|BSU03400||yckD||hypothetical protein (RefSeq)||55, 217|
|BSU04470||dctP||C4-dicarboxylate transporter DctA (RefSeq)||55, 168|
|BSU08060||acoA||acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) (RefSeq)||17, 55|
|BSU08120||yfjF||hypothetical protein (RefSeq)||55, 246|
|BSU10470||yhjD||hypothetical protein (RefSeq)||96, 178|
|BSU10740||yisJ||putative spore coat protein (RefSeq)||55, 356|
|BSU10900||yisY||putative hydrolase (RefSeq)||55, 278|
|BSU12080||ctaO||protoheme IX farnesyltransferase (heme O synthase) (RefSeq)||96, 189|
|BSU12500||xkdA||PBSX phage protein, putative peptidase (RefSeq)||64, 96|
|BSU13400||ligD||ATP-dependent DNA ligase (RefSeq)||87, 96|
|BSU13410||ykoV||ATP-dependent DNA ligase subunit (RefSeq)||55, 96|
|BSU16110||dprA||DNA processing Smf single strand binding protein (RefSeq)||96, 98|
|BSU17750||yndD||putative spore germination protein (RefSeq)||55, 278|
|BSU18600||yozQ||hypothetical protein (RefSeq)||55, 239|
|BSU18710||yozF||putative lipoprotein (RefSeq)||55, 96|
|BSU18720||yoaR||putative factor for cell wall maintenance or synthesis (RefSeq)||96, 127|
|BSU18770||cyeA||cysteine and O-acetyl serine efflux permease (RefSeq)||96, 180|
|BSU19760||cgeD||protein involved in maturation of the outermost layer of the spore (RefSeq)||41, 55|
|BSU21940||degR||activation of degradative enzymes (aprE, nprE, sacB) production or activity (RefSeq)||96, 342|
|BSU24580||yqhH||putative RNA polymerase-associated helicase protein (RefSeq)||55, 411|
|BSU24910||yqgM||putative glycosyltransferase (RefSeq)||71, 96|
|BSU24920||yqgL||hypothetical protein (RefSeq)||71, 96|
|BSU26120||yqbG||conserved hypothetical protein; skin element (RefSeq)||96, 239|
|BSU28900||ysbB||antiholin-like protein LrgB (RefSeq)||96, 405|
|BSU28910||ysbA||murein hydrolase regulator LrgA (RefSeq)||96, 405|
|BSU29020||gapB||glyceraldehyde-3-phosphate dehydrogenase (RefSeq)||55, 241|
|BSU30330||ytvB||putative conserved membrane protein (RefSeq)||55, 323|
|BSU30560||pckA||phosphoenolpyruvate carboxykinase (RefSeq)||55, 241|
|BSU31270||tgl||transglutaminase (RefSeq)||55, 99|
|BSU31420||yugF||putative hydrolase (RefSeq)||55, 96|
|BSU31430||yugE||hypothetical protein (RefSeq)||96, 163|
|BSU32020||yuiH||putative sulfite oxidase (RefSeq)||96, 291|
|BSU32190||yuzB||hypothetical protein (RefSeq)||96, 115|
|BSU32950||yusW||putative lipoprotein (RefSeq)||55, 411|
|BSU33050||gerAA||component of the GerA germination receptor (RefSeq)||96, 127|
|BSU33060||gerAB||component of the germination receptor GerA (RefSeq)||96, 127|
|BSU33070||gerAC||component of the germination receptor GerA (RefSeq)||96, 127|
|BSU33410||yvgO||hypothetical protein (RefSeq)||55, 137|
|BSU33640||yvaM||putative hydrolase (RefSeq)||55, 356|
|BSU33690||yvaQ||putative methyl-accepting transducer (RefSeq)||5, 96|
|BSU34000||cyeB||cysteine and O-acetylserine efflux permease (RefSeq)||96, 307|
|BSU35800||gerBA||component of germinant receptor B (RefSeq)||55, 278|
|BSU35810||gerBB||component of germinant receptor B (RefSeq)||55, 278|
|BSU35820||gerBC||lipoprotein component of the germination receptor B (RefSeq)||55, 278|
|BSU38250||ywbO||putative sulfur oxido-reductase (RefSeq)||96, 307|
|BSU38800||yxkH||putative exported polysaccharide deacetylase, lipoprotein (RefSeq)||96, 239|
|BSU39000||yxjC||putative permease (RefSeq)||55, 156|
|BSU40530||cotF||spore coat protein (RefSeq)||96, 174|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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