Organism : Bacillus subtilis | Module List :
Regulation information for BSU37140(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BSU37140
|Gene||Common Name||Description||Module membership|
|BSU00180||tadA||tRNA specific adenosine deaminase (RefSeq)||111, 123|
|BSU02970||yceK||putative transcriptional regulator (ArsR family) (RefSeq)||378, 402|
|BSU03260||ycgS||putative aromatic hydrocarbon hydrolase (RefSeq)||356, 378|
|BSU03620||yclA||putative transcriptional regulator (LysR family) (RefSeq)||109, 378|
|BSU04550||ydbP||putative thioredoxin or thiol-disulfide isomerase (RefSeq)||123, 373|
|BSU04610||ydcA||hypothetical protein (RefSeq)||115, 123|
|BSU05280||ydeO||putative integral inner membrane protein (RefSeq)||128, 378|
|BSU05370||ydfD||putative PLP-dependent transcriptional regulator (RefSeq)||262, 378|
|BSU05660||ydgI||putative dehydrogenase (RefSeq)||123, 262|
|BSU05670||ydgJ||putative transcriptional regulator (MarR family) (RefSeq)||123, 262|
|BSU05950||ydiF||putative ABC transporter (ATP-binding protein) (RefSeq)||123, 373|
|BSU07220||yetL||putative transcriptional regulator (MarR family) (RefSeq)||216, 378|
|BSU07660||yflJ||hypothetical protein (RefSeq)||123, 129|
|BSU07670||yflI||hypothetical protein (RefSeq)||123, 151|
|BSU08210||malQ||maltose and maltodextrin ABC transporter subunit (ATP-binding protein) (RefSeq)||123, 296|
|BSU08410||yfiV||putative transcriptional regulator (MarR family) (RefSeq)||200, 378|
|BSU08880||rpsN||30S ribosomal protein S14 (RefSeq)||123, 200|
|BSU08890||ygaO||putative integral inner membrane protein (RefSeq)||262, 378|
|BSU09430||citR||transcriptional regulator CitR (LysR family) (RefSeq)||109, 378|
|BSU10480||yhjE||putative integral inner membrane protein (RefSeq)||123, 262|
|BSU10490||sipV||type I signal peptidase (RefSeq)||123, 262|
|BSU10510||yhjH||putative transcriptional regulator (RefSeq)||109, 378|
|BSU11630||yjbP||bis(5'-nucleosyl)-tetraphosphatase PrpE (RefSeq)||31, 378|
|BSU11640||yjbQ||putative Na+/H+ antiporter (RefSeq)||123, 378|
|BSU12140||yjgA||hypothetical protein (RefSeq)||378, 402|
|BSU13150||ohrR||transcriptional regulator sensing organic peroxides (RefSeq)||111, 123|
|BSU14040||ykuD||murein transglycosylase (RefSeq)||262, 378|
|BSU14050||ykuE||putative metallophosphoesterase (RefSeq)||262, 378|
|BSU15060||ylbM||hypothetical protein (RefSeq)||111, 123|
|BSU15110||ylbQ||2-dehydropantoate 2-reductase (RefSeq)||123, 378|
|BSU18880||yobE||hypothetical protein (RefSeq)||337, 378|
|BSU19200||desR||two-component response regulator [DesK] (RefSeq)||157, 378|
|BSU19550||yodC||putative oxidoreductase (RefSeq)||200, 378|
|BSU22940||prsW||protease required for RsiW anti-sigma(W) degradation (RefSeq)||123, 311|
|BSU25040||yqgB||factor involved in motility (RefSeq)||324, 378|
|BSU25060||yqfZ||factor involved in motility (RefSeq)||123, 239|
|BSU25110||yqfU||putative integral inner membrane protein (RefSeq)||116, 123|
|BSU26380||yqaB||conserved hypothetical protein; skin element (RefSeq)||109, 378|
|BSU27000||yraB||putative transcriptional regulator (MerR family) (RefSeq)||123, 200|
|BSU27110||yrhO||putative transcriptional regulator (RefSeq)||216, 378|
|BSU27880||nifS||cysteine desulfurase (RefSeq)||15, 123|
|BSU31810||yuzE||hypothetical protein (RefSeq)||31, 378|
|BSU33420||nhaK||Na+/H+ antiporter (RefSeq)||31, 123|
|BSU33980||yvbT||putative alkanal monooxygenase (RefSeq)||262, 378|
|BSU35090||yvmA||putative efflux transporter (RefSeq)||123, 378|
|BSU36980||ywlA||putative integral inner membrane protein (RefSeq)||216, 378|
|BSU37140||ywjG||putative oxidoreductase (RefSeq)||123, 378|
|BSU37550||ywhA||putative transcriptional regulator (MarR family) (RefSeq)||111, 123|
|BSU37680||ywfH||carrier protein reductase of bacilysin synthesis (RefSeq)||123, 350|
|BSU38550||ywaA||branched-chain amino acid aminotransferase (RefSeq)||123, 145|
|BSU38950||yxjH||putative methyl-tetrahydrofolate methyltransferase (RefSeq)||28, 123|
|BSU38960||yxjG||putative methyltetrahydrofolate methyltransferase (RefSeq)||28, 123|
|BSU40700||yybB||putative hydrolase (RefSeq)||318, 378|
|BSU40760||yyaP||putative oxidoreductase (RefSeq)||109, 378|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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If the gene is a member of a module, regulators influencing that module are also considered to regulate the gene. Regulators table list total number of regulatory influences, regulators, modules and type of the influence.
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