Organism : Bacillus subtilis | Module List :
factor involved in motility (RefSeq)
Functional Annotations (1)
|cell wall macromolecule catabolic process||go/ biological_process|
Regulation information for BSU25060(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for BSU25060
|cell wall macromolecule catabolic process||go/ biological_process|
Module neighborhood information for BSU25060
|Gene||Common Name||Description||Module membership|
|BSU00180||tadA||tRNA specific adenosine deaminase (RefSeq)||111, 123|
|BSU04550||ydbP||putative thioredoxin or thiol-disulfide isomerase (RefSeq)||123, 373|
|BSU04610||ydcA||hypothetical protein (RefSeq)||115, 123|
|BSU05380||ydfE||putative flavoprotein (RefSeq)||174, 239|
|BSU05660||ydgI||putative dehydrogenase (RefSeq)||123, 262|
|BSU05670||ydgJ||putative transcriptional regulator (MarR family) (RefSeq)||123, 262|
|BSU05950||ydiF||putative ABC transporter (ATP-binding protein) (RefSeq)||123, 373|
|BSU07660||yflJ||hypothetical protein (RefSeq)||123, 129|
|BSU07670||yflI||hypothetical protein (RefSeq)||123, 151|
|BSU08210||malQ||maltose and maltodextrin ABC transporter subunit (ATP-binding protein) (RefSeq)||123, 296|
|BSU08880||rpsN||30S ribosomal protein S14 (RefSeq)||123, 200|
|BSU10480||yhjE||putative integral inner membrane protein (RefSeq)||123, 262|
|BSU10490||sipV||type I signal peptidase (RefSeq)||123, 262|
|BSU11640||yjbQ||putative Na+/H+ antiporter (RefSeq)||123, 378|
|BSU12460||xlyB||N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein (RefSeq)||239, 306|
|BSU12680||xkdO||conserved hypothetical protein; PBSX phage protein (RefSeq)||239, 269|
|BSU12710||xkdR||conserved hypothetical protein; putative PBSX prophage protein (RefSeq)||239, 269|
|BSU12790||xhlA||defective prophage PBSX putative enzyme (RefSeq)||7, 239|
|BSU13150||ohrR||transcriptional regulator sensing organic peroxides (RefSeq)||111, 123|
|BSU13480||ykrK||hypothetical protein (RefSeq)||150, 239|
|BSU14750||ylaE||hypothetical protein (RefSeq)||239, 353|
|BSU14800||ylaJ||putative lipoprotein (RefSeq)||239, 263|
|BSU15060||ylbM||hypothetical protein (RefSeq)||111, 123|
|BSU15110||ylbQ||2-dehydropantoate 2-reductase (RefSeq)||123, 378|
|BSU18600||yozQ||hypothetical protein (RefSeq)||55, 239|
|BSU18760||yoaU||putative transcriptional regulator (LysR family) (RefSeq)||200, 239|
|BSU18920||phrK||secreted regulator of the activity of phosphatase RapK (RefSeq)||239, 291|
|BSU19090||yobU||putative effector of transcriptional regulator (RefSeq)||64, 239|
|BSU19400||sodC||superoxide dismutase (exported lipoprotein) (RefSeq)||239, 359|
|BSU19410||cwlS||peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase) (RefSeq)||239, 353|
|BSU22000||sspL||small acid-soluble spore protein (RefSeq)||200, 239|
|BSU22940||prsW||protease required for RsiW anti-sigma(W) degradation (RefSeq)||123, 311|
|BSU24590||yqhG||hypothetical protein (RefSeq)||239, 411|
|BSU25060||yqfZ||factor involved in motility (RefSeq)||123, 239|
|BSU25110||yqfU||putative integral inner membrane protein (RefSeq)||116, 123|
|BSU25120||yqfT||hypothetical protein (RefSeq)||239, 280|
|BSU26120||yqbG||conserved hypothetical protein; skin element (RefSeq)||96, 239|
|BSU26940||yraH||putative lyase (RefSeq)||86, 239|
|BSU27000||yraB||putative transcriptional regulator (MerR family) (RefSeq)||123, 200|
|BSU27570||yrzK||hypothetical protein (RefSeq)||150, 239|
|BSU27670||spoVB||putative putative translocase with flippase function for teichoic acid synthesis; involved in spore cortex synthesis (stage V sporulation) (RefSeq)||127, 239|
|BSU27880||nifS||cysteine desulfurase (RefSeq)||15, 123|
|BSU29910||ytzH||hypothetical protein (RefSeq)||127, 239|
|BSU32270||yutH||spore coat-associated protein (RefSeq)||127, 239|
|BSU32280||yutG||putative phosphatidylglycerophosphatase A (RefSeq)||27, 239|
|BSU32320||yutC||putative lipoprotein (RefSeq)||239, 255|
|BSU33420||nhaK||Na+/H+ antiporter (RefSeq)||31, 123|
|BSU35090||yvmA||putative efflux transporter (RefSeq)||123, 378|
|BSU35770||tagC||putative polyglycerol phosphate assembly and export protein (teichoic acid biosynthesis) (RefSeq)||239, 307|
|BSU36090||ywrE||hypothetical protein (RefSeq)||166, 239|
|BSU37140||ywjG||putative oxidoreductase (RefSeq)||123, 378|
|BSU37550||ywhA||putative transcriptional regulator (MarR family) (RefSeq)||111, 123|
|BSU37680||ywfH||carrier protein reductase of bacilysin synthesis (RefSeq)||123, 350|
|BSU38550||ywaA||branched-chain amino acid aminotransferase (RefSeq)||123, 145|
|BSU38800||yxkH||putative exported polysaccharide deacetylase, lipoprotein (RefSeq)||96, 239|
|BSU38950||yxjH||putative methyl-tetrahydrofolate methyltransferase (RefSeq)||28, 123|
|BSU38960||yxjG||putative methyltetrahydrofolate methyltransferase (RefSeq)||28, 123|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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