In vivo vs. In vitro | C. diff Portal

Comparison of the expression profiles of the 630E strain after 8h, 14h and 38h of infection in mouse

Series: GSE43303,GSE43305 | Pubmed ID: 23897605 | Type: Expression profiling by array

Overall Design:Transcriptional profiling of the C. difficile 630E strain after 8h, 14h or 38h of infection in mouse.; Three-condition experiments: 630E strain 8h, 14h or 38h of infection in mouse vs. 630E strain 8h in culture. 4 biological replicates for each condition in dye swap.

There are 125 items in this group

Module_96 - Residual: 0.57 Type: Module

Motif 1: e-value:

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile:

Module_94 - Residual: 0.51 Type: Module

Motif 1: e-value:

Motif 2: e-value:

1st Quintile:
5th Quintile: In vivo vs. In vitro

Module_93 - Residual: 0.55 Type: Module

Motif 1:

e-value: 0.00000044

Motif 2:

e-value: 1.4

1st Quintile: In vivo vs. In vitro
5th Quintile: In vitro growth

Module_84 - Residual: 0.46 Type: Module

Motif 1:

e-value: 0.00000000000016

Motif 2: e-value:

1st Quintile:
5th Quintile: In vivo vs. In vitro

Module_82 - Residual: 0.39 Type: Module

Motif 1:

e-value: 0.0000000013

Motif 2: e-value:

1st Quintile: Sporulation
5th Quintile: In vivo vs. In vitro

Module_81 - Residual: 0.50 Type: Module

Motif 1:

e-value: 0.0000088

Motif 2: e-value:

1st Quintile:
5th Quintile: In vivo vs. In vitro

Module_80 - Residual: 0.21 Type: Module

Motif 1:

e-value: 0.08

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile: In vitro growth

Module_76 - Residual: 0.59 Type: Module

Motif 1:

e-value: 2.5e-17

Motif 2:

e-value: 0.19

1st Quintile:
5th Quintile: In vivo vs. In vitro

Module_73 - Residual: 0.60 Type: Module

Motif 1:

e-value: 0.00000000000089

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile:

Module_72 - Residual: 0.26 Type: Module

Motif 1:

e-value: 6.7

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile:

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