In vivo vs. In vitro | C. diff Portal

Comparison of the expression profiles of the 630E strain after 8h, 14h and 38h of infection in mouse

Series: GSE43303,GSE43305 | Pubmed ID: 23897605 | Type: Expression profiling by array

Overall Design:Transcriptional profiling of the C. difficile 630E strain after 8h, 14h or 38h of infection in mouse.; Three-condition experiments: 630E strain 8h, 14h or 38h of infection in mouse vs. 630E strain 8h in culture. 4 biological replicates for each condition in dye swap.

There are 125 items in this group

Module_70 - Residual: 0.56 Type: Module

Motif 1: e-value:

Motif 2: e-value:

1st Quintile:
5th Quintile: In vivo vs. In vitro

Module_69 - Residual: 0.52 Type: Module

Motif 1:

e-value: 0.00000094

Motif 2:

e-value: 0.00027

1st Quintile:
5th Quintile: In vivo vs. In vitro

Module_59 - Residual: 0.62 Type: Module

Motif 1:

e-value: 0.0000000022

Motif 2:

e-value: 0.00022

1st Quintile:
5th Quintile: In vivo vs. In vitro

Module_55 - Residual: 0.60 Type: Module

Motif 1:

e-value: 0.0000000000000037

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile: In vitro growth

Module_48 - Residual: 0.33 Type: Module

Motif 1:

e-value: 0.000068

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile: Early infection

Module_47 - Residual: 0.46 Type: Module

Motif 1:

e-value: 0.05

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile: In vitro growth

Module_46 - Residual: 0.58 Type: Module

Motif 1:

e-value: 0.000000000057

Motif 2:

e-value: 0.0000054

1st Quintile: In vivo vs. In vitro
5th Quintile:

Module_44 - Residual: 0.48 Type: Module

Motif 1: e-value:

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile:

Module_43 - Residual: 0.44 Type: Module

Motif 1:

e-value: 0.0000000000018

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile: In vitro growth

Module_10 - Residual: 0.37 Type: Module

Motif 1:

e-value: 0.0000036

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile:

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