263700 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263700 chr_10 HA 776653 778083 - HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7450740 Thaps263700.1, Thaps263700.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0048

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0033
 0.48

Most Highly Correlated Transcripts

bd1221

(bd1221) recQ_fam
0.8694

9943

hypothetical protein
0.8376

268350

SpoU_methylase
0.8354

8546

60KD_IMP superfamily
0.8311

37539

cpn10
0.8253

268519

hypothetical protein
0.8248

21291

hypothetical protein
0.8227

7558

DUF525 superfamily
0.8224

9247

hypothetical protein
0.8184

37187

COG5354
0.8149

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.3229 1.70E-12 177 - 242 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.3229 1.70E-12 177 - 242 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.3229 1.70E-12 177 - 242 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.3229 1.70E-12 177 - 242 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.3229 1.70E-12 177 - 242 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.3229 1.70E-12 177 - 242 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44572 PHATRDRAFT_44572 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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