4819 Bestrophin superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
4819	chr_4	Bestrophin superfamily	2002824	2004239	-	Bestrophin superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451355	Thaps4819.1, Thaps4819.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0010

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0159	0.26	310 9800

Most Highly Correlated Transcripts

4820 Bestrophin superfamily 0.9406	233 CdCA1 0.9138	260953 COG2423 0.8884	264181 hypothetical protein 0.8882	3353 FMN_dh 0.888	33000 FTHFS 0.8879
269147 NAD_binding_8 superfamily 0.8875	4370 hypothetical protein 0.8757	34585 PLN02389 0.8743	9352 LrgB superfamily 0.8636

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Bestrophin superfamily		Bestrophin, RFP-TM, chloride channel; Bestrophin is a 68-kDa basolateral plasma membrane protein...	-	135.345	2.15E-36	101 - 392	superfamily	260991

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_46336	PHATRDRAFT_46336	269573	207526	426591	Cre16.g662600.t1.2	AT3G61320.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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