Regulatory Modules
Displaying 81 - 90 of 170Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0032 | 5.7 | 59 | 0.43 | DVU0401, DVU0613, DVU0888, DVU0890, DVU0894, DVU0901, DVU0904, DVU0970, DVU1063, DVU2149, DVU2157, DVU2868, DVUA0151, DVU0426, DVU0892, DVU0906, DVU2539 | aromatic amino acid family metabolic pro..., aromatic amino acid family biosynthetic ..., UMP biosynthetic process, pyrimidine ribonucleoside monophosphate ..., pyrimidine ribonucleoside monophosphate ... |
bicluster_0100 | 3 | 530 | 0.43 | DVU1476, DVU1517, DVU1518, DVU1738, DVU1972, DVU2008, DVU2074, DVU2134, DVU2189, DVU2190, DVU2632, DVU2685, DVU0543, DVU1161, DVU1482, DVU1779, DVU1872, DVU1998, DVU2213, DVU3314 | chemotaxis, taxis, sequence-specific DNA binding, DNA binding, nucleic acid binding |
bicluster_0297 | 510 | 1300 | 0.43 | DVU0835, DVU0839, DVU0927, DVU0928, DVU1301, DVU1334, DVU1537, DVU1676, DVU1792, DVU1793, DVU1794, DVU1795, DVU1820, DVU1864, DVU1896, DVU2150, DVU2912, DVU2920, DVU2925 | cell cycle, organelle, non-membrane-bounded organelle, intracellular, intracellular part |
bicluster_0303 | 0.00013 | 3.6 | 0.43 | DVU0713, DVU0656, DVU0657, DVU0940, DVU1376, DVU1462, DVU1464, DVU1650, DVU1651, DVU1682, DVU2323, DVU2608, DVU2799, DVU2800, DVU2801, DVU3085, DVU3261, DVU3356 | protein complex assembly, cytochrome complex assembly, cellular macromolecular complex assembly, cellular protein complex assembly, macromolecular complex subunit organizat... |
bicluster_0066 | 2.4 | 3000 | 0.43 | DVU0416, DVU1192, DVU1987, DVU2089, DVU2100, DVU2108, DVU2362, DVU2363, DVU2440, DVU2487, DVU2488, DVU3315, DVU3381, DVU3382 | magnesium ion binding, hydrolase activity, acting on acid anhyd..., hydrolase activity, acting on acid anhyd..., 2 iron, 2 sulfur cluster binding, ion binding |
bicluster_0327 | 920 | 6.6 | 0.42 | DVU0021, DVU0091, DVU0327, DVU0336, DVU0340, DVU0451, DVU1056, DVU1276, DVU1347, DVU1611, DVU1772, DVU2367, DVU2558, DVU2757, DVU2942, DVU3167, DVU3168, DVU3174, DVU3175, DVU3239 | AMP biosynthetic process, AMP metabolic process, purine nucleoside biosynthetic process, purine ribonucleoside biosynthetic proce..., purine nucleoside metabolic process |
bicluster_0187 | 110 | 1100 | 0.42 | DVU1351, DVU1361, DVU1480, DVU1859, DVU1966, DVU2114, DVU2128, DVU2392, DVU0669, DVU1019, DVU1020, DVU1533, DVU1688, DVU2409, DVU2569, DVU3080, DVUA0017, DVUA0067, DVUA0068 | phospholipid metabolic process, phospholipid biosynthetic process, lipid biosynthetic process, cellular lipid metabolic process, lipid metabolic process |
bicluster_0190 | 0.00000064 | 1.7 | 0.42 | DVU0371, DVU0554, DVU0555, DVU0556, DVU0558, DVU0559, DVU0560, DVU0561, DVU0562, DVU1147, DVU1152, DVU1166, DVU1167, DVU1947, DVU1948, DVU2010, DVU2175, DVU1692, DVU2174, DVU2177 | DNA integration, carbohydrate metabolic process, oxidoreductase activity, acting on the a... |
bicluster_0288 | 0.86 | 4.1 | 0.42 | DVU0165, DVU0166, DVU0167, DVU0168, DVU0384, DVU0390, DVU1089, DVU1260, DVUA0069, DVUA0070, DVU0386, DVU0387, DVU0388, DVU1038, DVU1351, DVUA0074, DVUA0076 | integral component of membrane, intrinsic component of membrane, membrane part, intramolecular oxidoreductase activity, intramolecular oxidoreductase activity, ... |
bicluster_0248 | 230 | 4600 | 0.42 | DVU1199, DVU1314, DVU1623, DVU2226, DVU1197, DVU1198, DVU1203, DVU1204, DVU1304, DVU1305, DVU1306, DVU1307, DVU1315, DVU1321, DVU1322, DVU2929 | nucleobase-containing compound biosynthe..., nucleoside triphosphate biosynthetic pro..., ribonucleoside triphosphate biosynthetic..., nucleoside triphosphate metabolic proces..., ribonucleoside triphosphate metabolic pr... |