Organism : Methanococcus maripaludis S2 | Module List :
Regulation information for Unanno_8(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for Unanno_8
|Gene||Common Name||Description||Module membership|
|MMP0025||hypothetical protein MMP0025||8, 52|
|MMP0059||hypothetical protein MMP0059||8, 58, 64|
|MMP0061||aIF6||translation initiation factor IF-6||8, 61, 96, 138|
|MMP0093||50S ribosomal protein L21e||8, 11, 20|
|MMP0094||putative pseudouridylate synthase||8, 11|
|MMP0103||pyridoxal biosynthesis lyase PdxS||8, 27, 77|
|MMP0116||argC||N-acetyl-gamma-glutamyl-phosphate reductase||8, 51|
|MMP0127||hmd||H(2)-dependent methylenetetrahydromethanopterin dehydrogenase||8, 77|
|MMP0183||ribB||3,4-dihydroxy-2-butanone 4-phosphate synthase||8, 70|
|MMP0242||hypothetical protein MMP0242||8, 39, 96|
|MMP0290||nac||nascent polypeptide-associated complex protein||8, 78|
|MMP0308||SirA family protein||7, 78|
|MMP0309||DsrE family protein||8, 78|
|MMP0355||hypothetical protein MMP0355||52, 78|
|MMP0359||glycosyl transferase family protein||7, 78|
|MMP0371||hypothetical protein MMP0371||8, 70|
|MMP0377||isoleucyl-tRNA synthetase-like protein||52, 78|
|MMP0381||3-isopropylmalate dehydratase small subunit||78, 80|
|MMP0382||putative ATPase RIL||8, 70, 78|
|MMP0385||pyrH||uridylate kinase||70, 78|
|MMP0391||aspC||aspartate aminotransferase||77, 78|
|MMP0396||eno||phosphopyruvate hydratase||77, 78|
|MMP0397||alaS||alanyl-tRNA synthetase||70, 78|
|MMP0399||htpX||heat shock protein HtpX||70, 78|
|MMP0400||ehbQ||amino acid-binding ACT domain-containing protein||70, 78|
|MMP0407||hypothetical protein MMP0407||8, 19, 89|
|MMP0410||prsA||ribose-phosphate pyrophosphokinase||52, 78|
|MMP0414||thrS||threonyl-tRNA synthetase||8, 81, 112|
|MMP0500||Iron-sulfur flavoprotein-like protein||70, 78|
|MMP0539||leuB||multifunctional 3-isopropylmalate dehydrogenase/D-malate dehydrogenase||7, 8|
|MMP0540||purC||phosphoribosylaminoimidazole-succinocarboxamide synthase||8, 112, 143|
|MMP0597||flpA||fibrillarin||8, 16, 81|
|MMP0629||hypothetical protein MMP0629||8, 39|
|MMP0645||mdh||malate dehydrogenase||8, 39, 136|
|MMP0650||ilvB||acetolactate synthase catalytic subunit||8, 39|
|MMP0651||ilvH||acetolactate synthase 3 regulatory subunit||8, 39|
|MMP0657||hypothetical protein MMP0657||8, 29, 96|
|MMP0687||tpiA||triosephosphate isomerase||8, 13|
|MMP0697||leuS||leucyl-tRNA synthetase||8, 143|
|MMP0704||ParA type ATPase||8, 78, 112|
|MMP0736||PRC-barrel domain-containing protein||8, 19, 38|
|MMP0737||L-aspartate dehydrogenase||8, 38|
|MMP0816||seryl-tRNA synthetase-like protein||8, 70|
|MMP0898||cellulose-binding protein||8, 70|
|MMP0946||gatB||aspartyl/glutamyl-tRNA amidotransferase subunit B||8, 81, 96|
|MMP0965||formylmethanofuran dehydrogenase subunit E-like protein||8, 39, 136|
|MMP0971||purB||adenylosuccinate lyase||8, 11|
|MMP1021||hypothetical protein MMP1021||8, 21|
|MMP1023||TetR family transcriptional regulator||8, 21, 78|
|MMP1070||hypothetical protein MMP1070||8, 15|
|MMP1129||ppiB||cyclophilin type peptidyl-prolyl cis-trans isomerase||40, 70, 78|
|MMP1137||Lrp/AsnC family transcriptional regulator||70, 78|
|MMP1138||thiM||hydroxyethylthiazole kinase||70, 78|
|MMP1139||thiE||thiamine-phosphate pyrophosphorylase||27, 70, 78|
|MMP1213||hypothetical protein MMP1213||8, 89|
|MMP1308||tal||putative translaldolase||8, 16, 112|
|MMP1321||rps11p||30S ribosomal protein S11P||8, 105, 118|
|MMP1352||ribulose-1,5-biphosphate synthetase||7, 8, 78|
|MMP1512||alr||alanine racemase||8, 21|
|MMP1513||ald||alanine dehydrogenase||8, 21|
|MMP1527||aspartate aminotransferase||8, 21|
|MMP1531||hypothetical protein MMP1531||8, 66|
|MMP1588||serA||D-3-phosphoglycerate dehydrogenase||7, 8, 27, 77|
|MMP1589||carA||carbamoyl phosphate synthase small subunit||7, 78|
|MMP1656||glutamine amidotransferase subunit PdxT||8, 137|
|MMP1698||hypothetical protein MMP1698||4, 8|
|MMP1705||creatininase||8, 11, 20|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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