Module 12 Residual: 0.58

Title Bicluster Model Residual Score
bicluster_0012 v02 0.58 -19.63
Displaying 1 - 13 of 13
Rv0088

Details for Rv0088 -

GO Terms: GO:0005618, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.03 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0088

Tuberculist Genomic Region

Rv0125 Serine protease PepA

Details for Rv0125 - Serine protease PepA

GO Terms: GO:0005576

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.92 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0125

Tuberculist Genomic Region

Rv0131c PROBABLE ACYL-CoA DEHYDROGENASE FADE1 (EC 1.3.99.-)

Details for Rv0131c - PROBABLE ACYL-CoA DEHYDROGENASE FADE1 (EC 1.3.99.-)

GO Terms: GO:0005829

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.99 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0131c

Tuberculist Genomic Region

Rv0308 Possible membrane protein

Details for Rv0308 - Possible membrane protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.64 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0308

Tuberculist Genomic Region

Rv1142c Enoyl-CoA hydratase (EC 4.2.1.17) Rv1482c

Details for Rv1482c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.21 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1482c

Tuberculist Genomic Region

Rv1483 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)

Details for Rv1483 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)

GO Terms: GO:0004316, GO:0004316, GO:0005886, GO:0018454, GO:0042803, GO:0051289, GO:0071768

PATRIC Pathways: Fatty acid biosynthesis

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1483

Tuberculist Genomic Region

Rv1484 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)

Details for Rv1484 - Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)

GO Terms: GO:0004318, GO:0004318, GO:0005504, GO:0005886, GO:0030497, GO:0070403, GO:0071768

PATRIC Pathways: Fatty acid biosynthesis

Essentiality: Griffin Essential: 0.01 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1484

Tuberculist Genomic Region

Rv1485 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)

Details for Rv1485 - Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)

GO Terms: GO:0004325, GO:0005886, GO:0006783, GO:0040007, GO:0051537

PATRIC Pathways: Porphyrin and chlorophyll metabolism

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.04 | In vivo Essential: NA

Go to Gene Page: Rv1485

Tuberculist Genomic Region

Rv2280 Probable dehydrogenase

Details for Rv2280 - Probable dehydrogenase

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.90 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2280

Tuberculist Genomic Region

Rv2998

Details for Rv2998 -

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.71 | In vitro Essential: NA | In vivo Essential: 0.37

Go to Gene Page: Rv2998

Tuberculist Genomic Region

Rv3000 YbbM seven transmembrane helix protein

Details for Rv3000 - YbbM seven transmembrane helix protein

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.87 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3000

Tuberculist Genomic Region

Rv3220c Signal transduction histidine kinase, subgroup 2

Details for Rv3220c - Signal transduction histidine kinase, subgroup 2

GO Terms: GO:0000155, GO:0000160, GO:0004672, GO:0005524, GO:0046777

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.94 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3220c

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 3.3 e-value: 0.11
Displaying 1 - 1 of 1
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 24 of 24
GO:0005618 |

cell wall

GO:0005886 |

plasma membrane

GO:0005576 |

extracellular region

GO:0005829 |

cytosol

GO:0004300 |

enoyl-CoA hydratase activity

GO:0004316 |

3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity

GO:0018454 |

acetoacetyl-CoA reductase activity

GO:0042803 |

protein homodimerization activity

GO:0051289 |

protein homotetramerization

GO:0071768 |

mycolic acid biosynthetic process

GO:0004318 |

enoyl-[acyl-carrier-protein] reductase (NADH) activity

GO:0005504 |

fatty acid binding

GO:0030497 |

fatty acid elongation

GO:0070403 |

NAD+ binding

GO:0004325 |

ferrochelatase activity

GO:0006783 |

heme biosynthetic process

GO:0040007 |

growth

GO:0051537 |

2 iron, 2 sulfur cluster binding

GO:0000155 |

two-component sensor activity

GO:0000160 |

two-component signal transduction system (phosphorelay)

GO:0004672 |

protein kinase activity

GO:0005524 |

ATP binding

GO:0046777 |

protein autophosphorylation