Module 331 Residual: 0.41

Title Bicluster Model Residual Score
bicluster_0331 v02 0.41 -17.24
Displaying 1 - 17 of 17
Rv0046c Inositol-1-phosphate synthase (EC 5.5.1.4)

Details for Rv0046c - Inositol-1-phosphate synthase (EC 5.5.1.4)

GO Terms: GO:0004512, GO:0004512, GO:0008270, GO:0009405

PATRIC Pathways: Inositol phosphate metabolism, Streptomycin biosynthesis

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0046c

Tuberculist Genomic Region

Rv0145

Details for Rv0145 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.61 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0145

Tuberculist Genomic Region

Rv0146

Details for Rv0146 -

GO Terms: GO:0005829, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.99 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0146

Tuberculist Genomic Region

Rv0244c 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC)

Details for Rv0244c - 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC)

GO Terms: GO:0005576, GO:0005886, GO:0052572

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 1.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0244c

Tuberculist Genomic Region

Rv0483 Possible lipoprotein LprQ

Details for Rv0483 - Possible lipoprotein LprQ

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 1.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0483

Tuberculist Genomic Region

Rv1778c

Details for Rv1778c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.32 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1778c

Tuberculist Genomic Region

Rv1779c

Details for Rv1779c -

GO Terms: GO:0005829

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.38 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1779c

Tuberculist Genomic Region

Rv2428 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)

Details for Rv2428 - Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)

GO Terms: GO:0004601, GO:0005515, GO:0005886, GO:0008785, GO:0032843, GO:0045454, GO:0051260, GO:0051409, GO:0051920, GO:0055114

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.47 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2428

Tuberculist Genomic Region

Rv2429 Alkylhydroperoxidase protein D

Details for Rv2429 - Alkylhydroperoxidase protein D

GO Terms: GO:0005515, GO:0005886, GO:0032843, GO:0042803, GO:0045454, GO:0070207

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2429

Tuberculist Genomic Region

Rv2518c Lipoprotein LppS

Details for Rv2518c - Lipoprotein LppS

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.02 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2518c

Tuberculist Genomic Region

Rv2699c

Details for Rv2699c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.12 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2699c

Tuberculist Genomic Region

Rv2707 Ribonuclease BN (EC 3.1.-.-)

Details for Rv2707 - Ribonuclease BN (EC 3.1.-.-)

GO Terms: GO:0005618, GO:0046812

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.97 | In vitro Essential: NA | In vivo Essential: 0.19

Go to Gene Page: Rv2707

Tuberculist Genomic Region

Rv2724c Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Details for Rv2724c - Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 1.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2724c

Tuberculist Genomic Region

Rv3484 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)

Details for Rv3484 - Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)

GO Terms: GO:0005576, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: 0.25

Go to Gene Page: Rv3484

Tuberculist Genomic Region

Rv3567c Nitrilotriacetate monooxygenase component B (EC 1.14.13.-)
Rv3571 Phenylacetate-CoA oxygenase/reductase, PaaK subunit

Details for Rv3571 - Phenylacetate-CoA oxygenase/reductase, PaaK subunit

GO Terms: GO:0001666, GO:0051409

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.96 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3571

Tuberculist Genomic Region

Rv3570c POSSIBLE OXIDOREDUCTASE

Details for Rv3570c - POSSIBLE OXIDOREDUCTASE

GO Terms: GO:0005886, GO:0044117

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.14 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3570c

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.0000000081 e-value: 0.00082
Displaying 1 - 1 of 1
WhiB-like transcription regulator
regulates 13 modules
Weight: 
0.22
up-regulates
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
GO:0044238 | GO:0044237 | GO:0009987 | GO:0071704 | GO:0005623 | GO:0044464 | GO:0015934 | GO:0015935 primary metabolic process | cellular metabolic process | cellular process | organic substance metabolic process | cell | cell part | large ribosomal subunit | small ribosomal subunit
Displaying 1 - 23 of 23
GO:0004512 |

inositol-3-phosphate synthase activity

GO:0008270 |

zinc ion binding

GO:0009405 |

pathogenesis

GO:0005829 |

cytosol

GO:0005886 |

plasma membrane

GO:0005576 |

extracellular region

GO:0052572 |

response to host immune response

GO:0004601 |

peroxidase activity

GO:0005515 |

protein binding

GO:0008785 |

alkyl hydroperoxide reductase activity

GO:0032843 |

hydroperoxide reductase activity

GO:0045454 |

cell redox homeostasis

GO:0051260 |

protein homooligomerization

GO:0051409 |

response to nitrosative stress

GO:0051920 |

peroxiredoxin activity

GO:0055114 |

oxidation-reduction process

GO:0042803 |

protein homodimerization activity

GO:0070207 |

protein homotrimerization

GO:0005618 |

cell wall

GO:0046812 |

host cell surface binding

GO:0001666 |

response to hypoxia

GO:0044117 |

growth of symbiont in host