Module 382 Residual: 0.57

Title Bicluster Model Residual Score
bicluster_0382 v02 0.57 -16.46
Displaying 1 - 15 of 15
Rv0542c O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)

Details for Rv0542c - O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)

GO Terms: GO:0008756, GO:0040007

PATRIC Pathways: Ubiquinone and other terpenoid-quinone biosynthesis

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.15 | In vivo Essential: NA

Go to Gene Page: Rv0542c

Tuberculist Genomic Region

Rv0543c

Details for Rv0543c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.17 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0543c

Tuberculist Genomic Region

Rv3029c Electron transfer flavoprotein, beta subunit

Details for Rv3029c - Electron transfer flavoprotein, beta subunit

GO Terms: GO:0009055, GO:0006118, GO:0005829, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.01 | In vitro Essential: 0.18 | In vivo Essential: NA

Go to Gene Page: Rv3029c

Tuberculist Genomic Region

Rv3030 Methyltransferase (EC 2.1.1.-)
Rv3221c Biotin carboxyl carrier protein

Details for Rv3221c - Biotin carboxyl carrier protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.31 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3221c

Tuberculist Genomic Region

Rv0291 Type VII secretion-associated serine protease mycosin MycP3

Details for Rv0291 - Type VII secretion-associated serine protease mycosin MycP3

GO Terms: GO:0005576, GO:0005886, GO:0005887, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.05 | In vivo Essential: NA

Go to Gene Page: Rv0291

Tuberculist Genomic Region

Rv1340 Ribonuclease PH (EC 2.7.7.56)

Details for Rv1340 - Ribonuclease PH (EC 2.7.7.56)

GO Terms: GO:0009022, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.19 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1340

Tuberculist Genomic Region

Rv1597 Methyltransferase (EC 2.1.1.-)
Rv2883c Uridylate kinase (EC 2.7.4.-)

Details for Rv2883c - Uridylate kinase (EC 2.7.4.-)

GO Terms: GO:0005886, GO:0040007

PATRIC Pathways: Drug metabolism - other enzymes

Essentiality: Griffin Essential: 0.01 | In vitro Essential: 0.11 | In vivo Essential: NA

Go to Gene Page: Rv2883c

Tuberculist Genomic Region

Rv3028c Electron transfer flavoprotein, alpha subunit

Details for Rv3028c - Electron transfer flavoprotein, alpha subunit

GO Terms: GO:0006118, GO:0050660, GO:0009055, GO:0005618, GO:0005829, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3028c

Tuberculist Genomic Region

Rv3220c Signal transduction histidine kinase, subgroup 2

Details for Rv3220c - Signal transduction histidine kinase, subgroup 2

GO Terms: GO:0000155, GO:0000160, GO:0004672, GO:0005524, GO:0046777

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.94 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3220c

Tuberculist Genomic Region

Rv3677c FIG146518: Zn-dependent hydrolases, including glyoxylases

Details for Rv3677c - FIG146518: Zn-dependent hydrolases, including glyoxylases

GO Terms: GO:0008800

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.95 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3677c

Tuberculist Genomic Region

Rv3678c

Details for Rv3678c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.68 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3678c

Tuberculist Genomic Region

Rv3679 Arsenical pump-driving ATPase (EC 3.6.3.16)

Details for Rv3679 - Arsenical pump-driving ATPase (EC 3.6.3.16)

GO Terms: GO:0015446, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.61 | In vitro Essential: 0.08 | In vivo Essential: NA

Go to Gene Page: Rv3679

Tuberculist Genomic Region

Rv3680 Arsenical pump-driving ATPase (EC 3.6.3.16)

Details for Rv3680 - Arsenical pump-driving ATPase (EC 3.6.3.16)

GO Terms: GO:0015446, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.47 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3680

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.0047 e-value: 0.26
Displaying 1 - 1 of 1
response regulator
regulates 69 modules
Weight: 
0.20
up-regulates
Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
regulates 90 modules
Weight: 
0.20
up-regulates
regulates 26 modules
Weight: 
0.12
up-regulates
RNA polymerase sigma factor SigB
regulates 61 modules
Weight: 
0.12
up-regulates
regulates 18 modules
Weight: 
0.10
up-regulates
Transcriptional regulator, TetR family
regulates 54 modules
Weight: 
0.09
up-regulates
Transcriptional regulator, AraC family
regulates 32 modules
Weight: 
-0.08
down-regulates
Transcriptional regulator, TetR family
regulates 32 modules
Weight: 
0.08
up-regulates
\Transcriptional regulator, TetR family\\\""
regulates 32 modules
Weight: 
0.08
up-regulates
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 19 of 19
GO:0008756 |

o-succinylbenzoate-CoA ligase activity

GO:0040007 |

growth

GO:0009055 |

electron carrier activity

GO:0006118 |

electron transport

GO:0005829 |

cytosol

GO:0005886 |

plasma membrane

GO:0005576 |

extracellular region

GO:0005887 |

integral to plasma membrane

GO:0009022 |

tRNA nucleotidyltransferase activity

GO:0050660 |

flavin adenine dinucleotide binding

GO:0005618 |

cell wall

GO:0000155 |

two-component sensor activity

GO:0000160 |

two-component signal transduction system (phosphorelay)

GO:0004672 |

protein kinase activity

GO:0005524 |

ATP binding

GO:0046777 |

protein autophosphorylation

GO:0008800 |

beta-lactamase activity

GO:0015446 |

arsenite-transmembrane transporting ATPase activity