Rv0023 Transcriptional regulatory protein

Rv0023 (Transcriptional regulatory protein) is predicted to be co-regulated in modules bicluster_0304 with residual 0.58 and bicluster_0544 with residual 0.41.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.36 and 78.00 for bicluster_0304 and 420.00 and 780.00 for bicluster_0544 respectively.

These modules are enriched for following go terms: cellular ketone metabolic process cellular homeostasis, homeostatic process, regulation of biological quality, electron carrier activity.

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 81 - 90 of 174
Gene Target Differential Expression Distance Expression pvalue Type
Putative esterase
No -93 0.15 0.641828 Primary.TSS
NTP pyrophosphohydrolases including oxidative damage repair enzymes
No 6 -0.19 0.309173 CDS
Esterase, secreted fibronectin-binding protein antigen 85-B FbpB
No 54 0.58 0.00796685 Primary.TSS
N-terminal domain of CinA protein, COG1058 / C-terminal domain of CinA type S
No 17 -0.27 0.0143551 Antisense.TSS
PPE family protein
Repressed 63 -1.83 4.02e-17 Primary.TSS
Monooxygenase component A
Induced -44 0.63 0.0281444 Primary.TSS
Monooxygenase component C / Probable epoxide hydrolase EphB (EC 3.3.2.9)
No -45 -0.44 0.0829726 CDS
No -21 0.32 0.215302 Internal.TSS
No results were found NA -21 Primary.TSS
Induced -21 1.35 0.00000155 Antisense.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 12.35 U
D3I 3 3 3.83 11.63 I
D3U 3 3 3.83 11.40 U
D5I 9 5 6.00 12.32 I
D5U 17 5 6.00 12.61 U
D7I 18 7 8.14 8.45 I
D7U 19 7 8.14 11.60 U
D14I 4 14 15.63 6.26 I
D14U 4 14 15.63 9.95 U
D17I 3 17 19.15 5.13 I
D17U 3 17 19.15 9.94 U
D21I 4 21 23.23 5.32 I
D21U 4 21 23.23 9.06 U
D24I 3 24 26.60 4.70 I
D24U 3 24 26.60 9.32 U
D28I 4 28 30.61 5.55 I
D28U 4 28 30.61 8.40 U