Rv0324 Transcriptional regulator, ArsR family

Rv0324 (Transcriptional regulator, ArsR family) is predicted to be co-regulated in modules bicluster_0498 with residual 0.51 and bicluster_0546 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 6.30 for bicluster_0498 and 0.00 and 0.21 for bicluster_0546 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 61 - 70 of 161
Gene Target Differential Expression Distance Expression pvalue Type
No 3 0.04 0.939331 Internal.TSS
No -36 -0.36 0.308185 CDS
Probable phiRV1 phage protein
No -52 -0.18 0.662784 CDS
Probable phiRv1 integrase
No 5 0.26 0.298661 CDS
Probable phiRv1 integrase
No 23 0.26 0.298661 Internal.TSS
Partial REP13E12 repeat protein
Induced 4 0.71 0.00000045 Antisense.TSS
PE family protein
Repressed -6 -1.35 6.87e-30 Primary.TSS
Chalcone synthase (EC 2.3.1.74)
No -61 -0.28 0.0844511 Primary.TSS
AbpS-like protein
Induced -10 0.75 0.031407 Primary.TSS
Repressed -57 -2.05 1.29e-39 CDS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 9.75 U
D3I 3 3 3.83 9.21 I
D3U 3 3 3.83 9.54 U
D5I 9 5 6.00 9.00 I
D5U 17 5 6.00 11.09 U
D7I 18 7 8.14 6.42 I
D7U 19 7 8.14 8.94 U
D14I 4 14 15.63 3.03 I
D14U 4 14 15.63 6.75 U
D17I 3 17 19.15 I
D17U 3 17 19.15 5.68 U
D21I 4 21 23.23 1.11 I
D21U 4 21 23.23 5.41 U
D24I 3 24 26.60 I
D24U 3 24 26.60 5.48 U
D28I 4 28 30.61 1.11 I
D28U 4 28 30.61 4.81 U