Organism : Bacillus subtilis | Module List :
sporulation killing factor biosynthesis and export (RefSeq)
Functional Annotations (1)
Regulation information for BSU01970(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for BSU01970
Module neighborhood information for BSU01970
|Gene||Common Name||Description||Module membership|
|BSU01530||cwlD||N-acetylmuramoyl-L-alanine amidase (RefSeq)||33, 304|
|BSU01910||skfA||sporulation killing factor A (RefSeq)||33, 141|
|BSU01920||skfB||synthesis of sporulation killing factor A (RefSeq)||33, 141|
|BSU01950||skfE||sporulation killing factor biosynthesis and export; ABC transporter (binding protein) (RefSeq)||8, 33|
|BSU01960||skfF||sporulation killing factor biosynthesis and export; ABC transporter (permease) (RefSeq)||33, 141|
|BSU01970||skfG||sporulation killing factor biosynthesis and export (RefSeq)||8, 33|
|BSU02210||ybfH||putative permease (RefSeq)||8, 364|
|BSU02250||ybfJ||putative lipoprotein (RefSeq)||8, 205|
|BSU02320||ybfP||putative transcriptional regulator (AraC/XylS family) (RefSeq)||8, 360|
|BSU05890||ydhU||hypothetical protein (RefSeq)||8, 358|
|BSU06280||ydjP||putative peroxydase (RefSeq)||8, 74|
|BSU06920||yesJ||putative acetyltransferase (RefSeq)||33, 156|
|BSU06930||yesK||putative permease (RefSeq)||33, 156|
|BSU07130||lplD||putative glycosidase (RefSeq)||33, 129|
|BSU07560||pel||pectate lyase (RefSeq)||8, 205|
|BSU07840||yfkN||bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein (RefSeq)||33, 174|
|BSU08110||sspH||acid-soluble spore protein H (RefSeq)||33, 133|
|BSU08670||ygaB||hypothetical protein (RefSeq)||33, 278|
|BSU12320||yjmC||putative oxidoreductase (RefSeq)||26, 33|
|BSU12330||yjmD||putative oxidoreductase (RefSeq)||26, 33|
|BSU12340||uxuA||mannonate dehydratase (RefSeq)||26, 33|
|BSU12350||yjmF||D-mannonate oxidoreductase (RefSeq)||26, 33|
|BSU12360||exuT||hexuronate transporter (RefSeq)||33, 329|
|BSU13290||ykzD||hypothetical protein (RefSeq)||8, 277|
|BSU17830||yndM||putative integral inner membrane protein (RefSeq)||8, 183|
|BSU18010||yneN||putative membrane-bound proteins with a thioredoxin-like domain (RefSeq)||8, 358|
|BSU18150||xynC||endo-xylanase (RefSeq)||8, 295|
|BSU18290||yngL||putative integral inner membrane protein (RefSeq)||8, 358|
|BSU19660||yozD||hypothetical protein (RefSeq)||8, 230|
|BSU19750||cgeE||protein involved in maturation of the outermost layer of the spore (RefSeq)||8, 74|
|BSU21950||ypzA||hypothetical protein (RefSeq)||8, 205|
|BSU22280||yppD||hypothetical protein (RefSeq)||25, 33|
|BSU22570||ypiF||hypothetical protein (RefSeq)||33, 340|
|BSU24510||yqhO||hypothetical protein (RefSeq)||33, 86|
|BSU25750||nucB||nuclease (RefSeq)||33, 278|
|BSU25760||spoIVCB||RNA polymerase sporulation-specific sigma factor (sigma-K) (N-terminal half) (RefSeq)||33, 127|
|BSU28060||spoIIB||spatial and temporal regulator of the dissolution of septal peptidoglycan during engulfment (stage II sporulation) (RefSeq)||33, 277|
|BSU28210||lonB||LonB ATP-dependent protease (RefSeq)||8, 399|
|BSU30080||yteV||hypothetical protein (RefSeq)||8, 26|
|BSU32850||fadM||oxidoreductase involved in fatty acids degradation (RefSeq)||8, 74|
|BSU37480||ywhH||putative RNA-binding protein (RefSeq)||33, 350|
|BSU38230||ywcB||putative phage protein (superinfection immunity) (RefSeq)||33, 411|
|BSU38240||ywcA||putative acetate Na+-dependent symporter (RefSeq)||33, 250|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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