Organism : Bacillus subtilis | Module List :
Regulation information for BSU22570(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BSU22570
|Gene||Common Name||Description||Module membership|
|BSU01530||cwlD||N-acetylmuramoyl-L-alanine amidase (RefSeq)||33, 304|
|BSU01910||skfA||sporulation killing factor A (RefSeq)||33, 141|
|BSU01920||skfB||synthesis of sporulation killing factor A (RefSeq)||33, 141|
|BSU01950||skfE||sporulation killing factor biosynthesis and export; ABC transporter (binding protein) (RefSeq)||8, 33|
|BSU01960||skfF||sporulation killing factor biosynthesis and export; ABC transporter (permease) (RefSeq)||33, 141|
|BSU01970||skfG||sporulation killing factor biosynthesis and export (RefSeq)||8, 33|
|BSU06240||test||acetoin reductase/2,3-butanediol dehydrogenase (RefSeq)||90, 340|
|BSU06850||yeeK||spore associated protein (RefSeq)||99, 340|
|BSU06920||yesJ||putative acetyltransferase (RefSeq)||33, 156|
|BSU06930||yesK||putative permease (RefSeq)||33, 156|
|BSU07130||lplD||putative glycosidase (RefSeq)||33, 129|
|BSU07840||yfkN||bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein (RefSeq)||33, 174|
|BSU08110||sspH||acid-soluble spore protein H (RefSeq)||33, 133|
|BSU08670||ygaB||hypothetical protein (RefSeq)||33, 278|
|BSU10850||yisS||putative dehydrogenase (RefSeq)||256, 340|
|BSU12320||yjmC||putative oxidoreductase (RefSeq)||26, 33|
|BSU12330||yjmD||putative oxidoreductase (RefSeq)||26, 33|
|BSU12340||uxuA||mannonate dehydratase (RefSeq)||26, 33|
|BSU12350||yjmF||D-mannonate oxidoreductase (RefSeq)||26, 33|
|BSU12360||exuT||hexuronate transporter (RefSeq)||33, 329|
|BSU16980||spoVS||regulator required for dehydratation of the spore core and assembly of the coat (stage V sporulation) (RefSeq)||304, 340|
|BSU22280||yppD||hypothetical protein (RefSeq)||25, 33|
|BSU22570||ypiF||hypothetical protein (RefSeq)||33, 340|
|BSU22580||ypiB||hypothetical protein (RefSeq)||249, 340|
|BSU22590||ypiA||hypothetical protein (RefSeq)||249, 340|
|BSU23110||resE||two-component sensor histidine kinase (RefSeq)||189, 340|
|BSU23120||resD||two-component response regulator (RefSeq)||189, 340|
|BSU23130||resC||factor required for cytochrome c synthesis (RefSeq)||256, 340|
|BSU23140||resB||factor required for cytochrome c synthesis (RefSeq)||256, 340|
|BSU23150||resA||thiol-disulfide oxidoreductase (RefSeq)||256, 340|
|BSU24030||bkdB||branched-chain alpha-keto acid dehydrogenase subunit E2 (RefSeq)||134, 340|
|BSU24040||bkdAB||branched-chain alpha-keto acid dehydrogenase E1 subunit (RefSeq)||134, 340|
|BSU24050||bkdAA||branched-chain alpha-keto acid dehydrogenase E1 subunit (RefSeq)||134, 340|
|BSU24060||lpdV||dihydrolipoamide dehydrogenase (RefSeq)||134, 340|
|BSU24070||buk||butyrate kinase (RefSeq)||134, 340|
|BSU24080||bcd||branched-chain amino acid dehydrogenase (RefSeq)||134, 340|
|BSU24090||ptb||phosphate butyryltransferase (RefSeq)||134, 340|
|BSU24510||yqhO||hypothetical protein (RefSeq)||33, 86|
|BSU25750||nucB||nuclease (RefSeq)||33, 278|
|BSU25760||spoIVCB||RNA polymerase sporulation-specific sigma factor (sigma-K) (N-terminal half) (RefSeq)||33, 127|
|BSU27220||yrhE||putative oxido-reductase (RefSeq)||169, 340|
|BSU27230||yrhD||hypothetical protein (RefSeq)||169, 340|
|BSU28060||spoIIB||spatial and temporal regulator of the dissolution of septal peptidoglycan during engulfment (stage II sporulation) (RefSeq)||33, 277|
|BSU29670||tyrS||tyrosyl-tRNA synthetase (RefSeq)||90, 340|
|BSU29890||ytnP||putative metal-dependent hydrolase (RefSeq)||169, 340|
|BSU30660||ytkA||putative lipoprotein (RefSeq)||22, 340|
|BSU31690||comP||two-component sensor histidine kinase (RefSeq)||90, 340|
|BSU31700||comX||competence pheromone precursor (pheromone peptide aa 46->55, modified) (RefSeq)||90, 340|
|BSU37480||ywhH||putative RNA-binding protein (RefSeq)||33, 350|
|BSU38230||ywcB||putative phage protein (superinfection immunity) (RefSeq)||33, 411|
|BSU38240||ywcA||putative acetate Na+-dependent symporter (RefSeq)||33, 250|
|BSU39430||deoR||transcriptional regulator (RefSeq)||22, 340|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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