Organism : Bacillus subtilis | Module List :
Regulation information for BSU09510(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BSU09510
|Gene||Common Name||Description||Module membership|
|BSU01750||ybbP||hypothetical protein (RefSeq)||38, 265|
|BSU04320||ydaO||putative metabolite transporter (RefSeq)||38, 270|
|BSU04570||murF||UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanine ligase (RefSeq)||170, 409|
|BSU05080||yddR||putative metal-dependent hydrolase (RefSeq)||38, 255|
|BSU05090||yddS||putative permease (RefSeq)||38, 115|
|BSU05340||ydfA||putative metal-anion antiporter protein (RefSeq)||14, 38|
|BSU05640||ydgG||putative transcriptional regulator (MarR family) (RefSeq)||38, 178|
|BSU05650||ydgH||putative membrane component (RefSeq)||38, 178|
|BSU07700||nagP||phosphotransferase system (PTS) N-acetylglucosamine-specific enzyme IICB component (RefSeq)||38, 365|
|BSU08020||yfjO||putative RNA methyltransferase (RefSeq)||170, 191|
|BSU09460||ctrA||branched-chain amino acid transporter (RefSeq)||38, 311|
|BSU09500||yhdK||negative regulator of the activity of sigma-M (RefSeq)||38, 44|
|BSU09510||yhdL||negative regulator of the activity of sigma-M (RefSeq)||38, 170|
|BSU09520||sigM||RNA polymerase sigma factor SigM (RefSeq)||38, 193|
|BSU13430||ykoX||putative integral inner membrane protein (RefSeq)||38, 89|
|BSU13920||splA||TRAP-like transcriptional regulator (RefSeq)||170, 274|
|BSU14440||ykpB||2-dehydropantoate 2-reductase (RefSeq)||170, 173|
|BSU14630||speA||arginine decarboxylase (RefSeq)||51, 170|
|BSU14990||ylbF||putative regulatory protein (RefSeq)||159, 170|
|BSU15150||ftsL||cell-division protein (RefSeq)||170, 377|
|BSU15160||pbpB||penicillin-binding protein 2B (RefSeq)||170, 377|
|BSU15240||divIB||cell-division initiation protein (RefSeq)||170, 228|
|BSU15250||ylxW||hypothetical protein (RefSeq)||170, 228|
|BSU16170||codY||transcriptional repressor CodY (RefSeq)||167, 170|
|BSU16640||ylxP||hypothetical protein (RefSeq)||170, 292|
|BSU17290||ebrB||small multidrug efflux transporter (RefSeq)||38, 294|
|BSU17300||ebrA||small multidrug resistance efflux transporter (RefSeq)||38, 44|
|BSU19100||yobV||putative transcriptional regulator (RefSeq)||64, 170|
|BSU19170||yocD||putative carboxypeptidase (RefSeq)||51, 170|
|BSU21710||dinF||damage inducible, Na+ driven multidrug efflux pump (RefSeq)||67, 170|
|BSU21720||ypmT||hypothetical protein (RefSeq)||116, 170|
|BSU21800||ypkP||putative acyltransferase (RefSeq)||53, 170|
|BSU24840||yqgS||putative anion transporter and exported enzyme (RefSeq)||97, 170|
|BSU25310||dgkA||undecaprenol kinase (RefSeq)||170, 193|
|BSU25330||yqfF||putative membrane associate hydrolase (RefSeq)||170, 221|
|BSU25640||nadD||nicotinic acid mononucleotide adenylyltransferase (RefSeq)||166, 170|
|BSU25660||aroE||shikimate 5-dehydrogenase (RefSeq)||166, 170|
|BSU26610||yrkA||putative membrane associated protein (RefSeq)||159, 170|
|BSU26670||gltR||transcriptional regulator (LysR family) (RefSeq)||38, 270|
|BSU26690||brnQ||low-affinity branched-chain amino acid transporter (RefSeq)||38, 327|
|BSU26770||yrdB||putative integral inner membrane protein (RefSeq)||38, 327|
|BSU27090||aapA||d-Serine/d-alanine/glycine permease (RefSeq)||38, 66|
|BSU27140||oatA||peptidoglycan O-acetyltransferase (RefSeq)||38, 270|
|BSU27640||yrvC||putative potassium transport accessory component (RefSeq)||170, 202|
|BSU27930||spo0B||sporulation initiation phosphotransferase (RefSeq)||170, 292|
|BSU35200||yvkB||putative transcriptional regulator (TetR/AcrR family) (RefSeq)||38, 132|
|BSU35210||yvkA||putative efflux transporter (RefSeq)||38, 409|
|BSU35840||ywtF||putative transcriptional regulator (RefSeq)||159, 170|
|BSU36760||murAA||UDP-N-acetylglucosamine 1-carboxyvinyltransferase (RefSeq)||170, 325|
|BSU37990||ywdE||putative integral inner membrane protein (RefSeq)||38, 111|
|BSU38000||ywdD||putative integral inner membrane protein (RefSeq)||38, 111|
|BSU38120||rodA||factor involved in extension of the lateral walls of the cell (RefSeq)||38, 409|
|BSU38890||yxjN||putative integral inner membrane protein (RefSeq)||38, 233|
|BSU39990||yxaF||transcriptional regulator (RefSeq)||38, 270|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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