Organism : Clostridium acetobutylicum | Module List :
Regulation information for CAC1520(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for CAC1520
|Gene||Common Name||Description||Module membership|
|CAC0011||CAC0011||Uncharacterized conserved of ErfK family (NCBI ptt file)||113, 279|
|CAC0205||CAC0205||Predicted phosphohydrolases, Icc family (NCBI ptt file)||62, 279|
|CAC0262||CAC0262||Tryptophan-rich possible sensory protein, TSPO homolog (NCBI ptt file)||95, 279|
|CAC0354||CAC0354||Uncharacterized membrane protein (NCBI ptt file)||279, 312|
|CAC0604||CAC0604||Acyl carrier protein phosphodiesterase (NCBI ptt file)||57, 279|
|CAC0609||CAC0609||Cyclic beta 1-2 glucan synthetase (NCBI ptt file)||118, 188|
|CAC0686||CAC0686||Spore cortex-lytic enzyme prepeptide; peptodoglycan-binding domain (NCBI ptt file)||118, 341|
|CAC0769||CAC0769||Uncharacterized conserved protein (NCBI ptt file)||118, 314|
|CAC0793||CAC0793||Uncharacterized conserved protein of probably eukaryotic origin (NCBI ptt file)||279, 314|
|CAC0868||CAC0868||Predicted membrane protein (NCBI ptt file)||118, 304|
|CAC1423||CAC1423||Predicted dehydrogenase of short-chain alcohol dehydrogenase family, ortholog of YHDF B.subtilis (NCBI ptt file)||118, 300|
|CAC1486||CAC1486||Uncharacterized protein, ortholog of YKUS B.subtilis (NCBI ptt file)||118, 367|
|CAC1520||CAC1520||Hypothetical protein (NCBI ptt file)||118, 279|
|CAC1653||CAC1653||Predicted glycosyltransferases involved in cell wall biogenesis (NCBI ptt file)||73, 118|
|CAC1657||CAC1657||Uncharacterized conserved protein, yisX B.subtilis ortholog (NCBI ptt file)||279, 326|
|CAC1662||CAC1662||Hypothetical protein (NCBI ptt file)||142, 279|
|CAC1706||CAC1706||Phosphate permease (NCBI ptt file)||118, 245|
|CAC1707||CAC1707||Permease component of ATP-dependent phosphate uptake system (NCBI ptt file)||118, 245|
|CAC1985||CAC1985||Hypothetical protein (NCBI ptt file)||279, 300|
|CAC2034||CAC2034||Hypothetical protein (NCBI ptt file)||38, 279|
|CAC2089||CAC2089||Stage III sporulation protein AE, SpoIIIAE (NCBI ptt file)||263, 279|
|CAC2303||CAC2303||Stage V sporulation AE, SpoVAE (fragment) (NCBI ptt file)||22, 118|
|CAC2305||SpoVAC||Stage V sporulation AC, SpoVAC (NCBI ptt file)||110, 118|
|CAC2345||CAC2345||Glycosyltransferase (NCBI ptt file)||100, 279|
|CAC2352||CAC2352||Hypothetical protein (NCBI ptt file)||279, 330|
|CAC2353||CAC2353||Hypothetical protein (NCBI ptt file)||279, 330|
|CAC2354||CAC2354||Nifs family aminotransferase (NCBI ptt file)||41, 279|
|CAC2363||CAC2363||Uncharacterized protein, YtxC B.subtilis homolog (NCBI ptt file)||95, 279|
|CAC2412||CAC2412||Hypothetical protein (NCBI ptt file)||105, 279|
|CAC2459||CAC2459||2-oxoacid:ferredoxin oxidoreductase, alpha subunit (NCBI ptt file)||142, 279|
|CAC2569||CAC2569||NimC/NimA family protein (NCBI ptt file)||279, 320|
|CAC2679||CAC2679||Pullulanase (NCBI ptt file)||267, 279|
|CAC2843||CAC2843||Protein containing aminopeptidase domain (iap family) (NCBI ptt file)||39, 279|
|CAC2863||CAC2863||Predicted membrane protein (NCBI ptt file)||102, 279|
|CAC2941||CAC2941||HAD superfamily hydrolase (NCBI ptt file)||47, 279|
|CAC2945||CAC2945||Possible phosphoglycerate dehydrogenase (NCBI ptt file)||279, 363|
|CAC2981||CAC2981||Mannose-1-phosphate guanyltransferase (pyrophosphorylase domain and phosphomannomutase domain) (NCBI ptt file)||118, 123|
|CAC3016||CAC3016||Uncharacterized conserved membrane protein (NCBI ptt file)||95, 118|
|CAC3031||hisC||Histidinol-phosphate aminotransferase (NCBI ptt file)||142, 279|
|CAC3077||CAC3077||Uncharacterized FAD-dependent dehydrogenase (NCBI ptt file)||118, 142|
|CAC3204||CAC3204||Cell cycle protein MesJ ortholog, ATPase of the PP-loop superamily (NCBI ptt file)||142, 279|
|CAC3213||CAC3213||Possible stage V sporulation protein B, predicted transporter (NCBI ptt file)||86, 118|
|CAC3245||CAC3245||Subtilisin like protease (two fused domains) (NCBI ptt file)||118, 330|
|CAC3357||CAC3357||Hypothetical protein (NCBI ptt file)||118, 174|
|CAC3402||CAC3402||Dipeptidyl aminopeptidase/acylaminoacyl-peptidase related protein (NCBI ptt file)||118, 317|
|CAC3403||CAC3403||Predicted membrane protein (NCBI ptt file)||118, 317|
|CAC3684||CAC3684||Polygalacturonase (NCBI ptt file)||22, 118|
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If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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