Regulatory Modules
Displaying 31 - 40 of 170Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0047 | 350 | 3200 | 0.36 | DVU0016, DVU0545, DVU2192, DVU2327, DVU2426, DVUA0011, DVUA0056, DVU1712, DVU1716, DVU1754, DVU2278, DVU2832 | oxidoreductase activity, acting on iron-... |
bicluster_0048 | 170 | 170 | 0.44 | DVU0079, DVU0128, DVU0327, DVU0413, DVU0612, DVU1019, DVU1242, DVU1458, DVU1590, DVU1611, DVU1813, DVU1814, DVU2243, DVU2409, DVU2484, DVU2485, DVU2762, DVU2787, DVU3255, DVU3261, DVU3375, DVU0441 | aromatic compound catabolic process, cellular nitrogen compound catabolic pro..., heterocycle catabolic process, organic cyclic compound catabolic proces..., cellular respiration |
bicluster_0053 | 0.29 | 44 | 0.49 | DVU0146, DVU0148, DVU0149, DVU0150, DVU0152, DVU0372, DVU0458, DVU0593, DVU0678, DVU0751, DVU0805, DVU0806, DVU0882, DVU1670, DVU2014, DVU2061, DVU2104, DVU2952, DVU3125, DVU3182, DVU3188, DVU3384, DVUA0036, DVUA0061, DVU0147, DVU0594, DVU2088 | integral component of membrane, intrinsic component of membrane, FMN binding |
bicluster_0056 | 0.000000029 | 0.000062 | 0.48 | DVU0153, DVU0157, DVU0792, DVU0879, DVU0880, DVU0886, DVU1407, DVU1409, DVU1663, DVU1664, DVU1665, DVU1954, DVU2300, DVU2340, DVU3054, DVU3149, DVU3150, DVU3186, DVU0054, DVU0502, DVU1087, DVU1576, DVU1666 | serine-type endopeptidase activity, serine-type peptidase activity, serine hydrolase activity |
bicluster_0058 | 2700 | 4800 | 0.38 | DVU0197, DVU0206, DVU0207, DVU0209, DVU0210, DVU0211, DVU0212, DVU0214, DVU0216, DVU0217, DVU0219, DVU2850, DVU2851, DVU2853, DVU2857, DVU2858, DVU2859, DVU2861, DVU2864, DVU2860 | |
bicluster_0059 | 4000 | 4400 | 0.31 | DVU0860, DVU0889, DVU2122, DVU2129, DVU2154, DVU2156, DVU2172, DVU3285, DVU2125, DVU2170 | peptidase activity |
bicluster_0061 | 23 | 30 | 0.49 | DVU0429, DVU0431, DVU0433, DVU0434, DVU3286, DVUA0001, DVUA0002, DVUA0003, DVUA0021, DVUA0022, DVUA0024, DVUA0035, DVUA0047, DVUA0064, DVUA0083, DVUA0092, DVUA0146, DVUA0148, DVUA0149, DVUA0046 | nucleoside triphosphate metabolic proces..., ribonucleoside triphosphate metabolic pr..., cellular respiration, energy derivation by oxidation of organi..., electron transport chain |
bicluster_0063 | 1.2 | 390 | 0.47 | DVU0056, DVU0227, DVU0334, DVU0395, DVU0454, DVU0575, DVU0619, DVU0620, DVU0656, DVU0854, DVU1090, DVU1408, DVU1537, DVU1579, DVU1616, DVU1820, DVU1877, DVU1888, DVU2471, DVU2612, DVU2644, DVU3345, DVU0034, DVU1434, DVU2639, DVU3281, DVU3359 | deaminase activity, ATP binding, adenyl ribonucleotide binding, adenyl nucleotide binding |
bicluster_0064 | 65 | 290 | 0.48 | DVU0830, DVU0831, DVU1042, DVU1043, DVU1249, DVU1250, DVU1274, DVU1841, DVU2225, DVU2332, DVU2333, DVU2536, DVU3090, DVU3245, DVU0002, DVU0003, DVU0285, DVU0501, DVU0505, DVU1078, DVU2904 | glutamine family amino acid biosynthetic..., glutamine family amino acid metabolic pr..., alpha-amino acid biosynthetic process, cellular amino acid biosynthetic process, organic acid biosynthetic process |
bicluster_0066 | 2.4 | 3000 | 0.43 | DVU0416, DVU1192, DVU1987, DVU2089, DVU2100, DVU2108, DVU2362, DVU2363, DVU2440, DVU2487, DVU2488, DVU3315, DVU3381, DVU3382 | magnesium ion binding, hydrolase activity, acting on acid anhyd..., hydrolase activity, acting on acid anhyd..., 2 iron, 2 sulfur cluster binding, ion binding |