Organism : Bacillus subtilis | Module List :
Regulation information for BSU03690(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BSU03690
|Gene||Common Name||Description||Module membership|
|BSU01590||ybaS||putative sodium dependent transporter (RefSeq)||86, 231|
|BSU02110||ybyB||hypothetical protein (RefSeq)||231, 299|
|BSU02510||garD||D-galactarate dehydratase (RefSeq)||180, 326|
|BSU03120||ycgI||putative methyltransferase (RefSeq)||156, 180|
|BSU03690||yczF||hypothetical protein (RefSeq)||180, 231|
|BSU03700||gerKA||spore germination receptor subunit (RefSeq)||180, 290|
|BSU03710||gerKC||spore germination receptor subunit (RefSeq)||180, 290|
|BSU03720||gerKB||spore germination receptor subunit (RefSeq)||180, 290|
|BSU03730||yclH||putative ABC transporter (ATPase component) (RefSeq)||180, 405|
|BSU03740||yclI||putative transporter (RefSeq)||71, 180|
|BSU03900||gabT||4-aminobutyrate aminotransferase (RefSeq)||173, 231|
|BSU05450||ydfK||putative integral inner membrane protein (RefSeq)||180, 290|
|BSU05710||ydhD||spore cortex lytic enzyme (RefSeq)||180, 304|
|BSU06150||gutB||glucitol (sorbitol) dehydrogenase (RefSeq)||180, 326|
|BSU06170||ydjE||putative sugar kinase (ribokinase family) (RefSeq)||222, 231|
|BSU08310||yfiL||putative ABC transporter (ATP-binding protein) (RefSeq)||180, 406|
|BSU08320||yfiM||putative ABC transporter (permease) (RefSeq)||180, 406|
|BSU11130||ipi||intracellular proteinase inhibitor BsuPI (RefSeq)||149, 180|
|BSU12190||yjhB||putative ADP-ribose pyrophosphatase (RefSeq)||180, 257|
|BSU12300||uxaC||glucuronate isomerase (RefSeq)||152, 180|
|BSU12310||exuM||putative Na+:altronate/mannonate symporter (RefSeq)||152, 180|
|BSU12390||uxaA||altronate hydrolase (RefSeq)||180, 318|
|BSU12490||yjqC||putative PBSX phage manganese-containing catalase (RefSeq)||231, 246|
|BSU13190||ispA||intracellular serine protease (RefSeq)||222, 231|
|BSU13350||ykoN||putative glycosyltransferase (RefSeq)||43, 180|
|BSU13360||ykoP||hypothetical protein (RefSeq)||43, 180|
|BSU13380||ykoS||putative integral inner membrane protein (RefSeq)||180, 282|
|BSU14410||sipT||type I signal peptidase (RefSeq)||165, 231|
|BSU14720||ylaB||hypothetical protein (RefSeq)||89, 231|
|BSU14740||ylaD||anti-YlaC sigma factor (RefSeq)||231, 361|
|BSU18770||cyeA||cysteine and O-acetyl serine efflux permease (RefSeq)||96, 180|
|BSU19800||phy||phytase (RefSeq)||129, 231|
|BSU20190||yosA||hypothetical protein from phage SPbeta (RefSeq)||180, 326|
|BSU23080||aroD||3-dehydroquinate dehydratase (RefSeq)||128, 231|
|BSU25730||yqeC||6-phosphogluconate dehydrogenase-like protein (RefSeq)||231, 263|
|BSU27080||levR||transcriptional regulator (NifA/NtrC family) (RefSeq)||219, 231|
|BSU27420||yrrI||putative permease (RefSeq)||174, 231|
|BSU30250||ytaP||putative hydrolase (RefSeq)||26, 231|
|BSU32230||yuxL||putative acylaminoacyl-peptidase (RefSeq)||231, 285|
|BSU32410||pucH||allantoinase (RefSeq)||231, 257|
|BSU32450||pucL||urate oxidase with peroxide reductase N-terminal domain (RefSeq)||29, 231|
|BSU32460||pucM||urate oxidase structural factor (RefSeq)||52, 231|
|BSU32500||pucB||enzyme for molybdopterin cofactor synthesis required for xanthine dehydrogenase (RefSeq)||29, 231|
|BSU32510||pucA||xanthine dehydrogenase molybdopterin recruitment factor (RefSeq)||86, 231|
|BSU34460||levB||endolevanase (RefSeq)||130, 231|
|BSU35190||yvkC||putative phosphotransferase (RefSeq)||180, 248|
|BSU38440||ywaF||putative integral inner membrane protein (RefSeq)||180, 278|
|BSU38640||yxlH||putative efflux transporter (RefSeq)||180, 318|
|BSU38790||yxzE||putative bacteriocin (RefSeq)||231, 406|
|BSU38970||yxjF||3-hydroxybutyrate dehydrogenase (RefSeq)||165, 231|
|BSU38980||scoB||succinyl CoA:3-oxoacid CoA-transferase (subunit B) (RefSeq)||29, 231|
|BSU38990||scoA||succinyl CoA:3-oxoacid CoA-transferase (subunit A) (RefSeq)||156, 180|
|BSU40430||yycE||hypothetical protein (RefSeq)||156, 231|
|BSU40570||yybO||putative permease (RefSeq)||130, 231|
|BSU40740||yyaR||putative acetyl-transferase (RefSeq)||200, 231|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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