Organism : Bacillus subtilis | Module List :
Regulation information for BSU32320(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BSU32320
|Gene||Common Name||Description||Module membership|
|BSU02120||ybeC||putative H+/amino acid transporter (RefSeq)||219, 255|
|BSU04620||acpS||4'-phosphopantetheinyl transferase (RefSeq)||245, 255|
|BSU05050||lrpA||transcriptional regulator (Lrp/AsnC family) (RefSeq)||197, 255|
|BSU05070||yddQ||putative hydrolase (RefSeq)||23, 255|
|BSU05080||yddR||putative metal-dependent hydrolase (RefSeq)||38, 255|
|BSU05320||ydeS||putative transcriptional regulator (TetR/AcrR family) (RefSeq)||233, 255|
|BSU05380||ydfE||putative flavoprotein (RefSeq)||174, 239|
|BSU05420||ydfI||two-component response regulator [YdfH] (RefSeq)||199, 255|
|BSU08050||yfjL||hypothetical protein (RefSeq)||102, 255|
|BSU08710||gsaB||glutamate-1-semialdehyde aminotransferase (RefSeq)||255, 322|
|BSU11720||fabI||enoyl-(acyl carrier protein) reductase (RefSeq)||255, 309|
|BSU12460||xlyB||N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein (RefSeq)||239, 306|
|BSU12680||xkdO||conserved hypothetical protein; PBSX phage protein (RefSeq)||239, 269|
|BSU12710||xkdR||conserved hypothetical protein; putative PBSX prophage protein (RefSeq)||239, 269|
|BSU12790||xhlA||defective prophage PBSX putative enzyme (RefSeq)||7, 239|
|BSU13480||ykrK||hypothetical protein (RefSeq)||150, 239|
|BSU14520||adeC||adenine deaminase (RefSeq)||42, 255|
|BSU14550||ykrA||putative hydrolase (RefSeq)||23, 255|
|BSU14750||ylaE||hypothetical protein (RefSeq)||239, 353|
|BSU14800||ylaJ||putative lipoprotein (RefSeq)||239, 263|
|BSU17660||yncF||putative deoxyuridine 5'-triphosphate pyrophosphatase (RefSeq)||135, 255|
|BSU17680||thyA||thymidylate synthase (RefSeq)||128, 255|
|BSU18600||yozQ||hypothetical protein (RefSeq)||55, 239|
|BSU18760||yoaU||putative transcriptional regulator (LysR family) (RefSeq)||200, 239|
|BSU18920||phrK||secreted regulator of the activity of phosphatase RapK (RefSeq)||239, 291|
|BSU19090||yobU||putative effector of transcriptional regulator (RefSeq)||64, 239|
|BSU19400||sodC||superoxide dismutase (exported lipoprotein) (RefSeq)||239, 359|
|BSU19410||cwlS||peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase) (RefSeq)||239, 353|
|BSU19480||yojE||putative integral inner membrane protein (RefSeq)||102, 255|
|BSU22000||sspL||small acid-soluble spore protein (RefSeq)||200, 239|
|BSU24590||yqhG||hypothetical protein (RefSeq)||239, 411|
|BSU25060||yqfZ||factor involved in motility (RefSeq)||123, 239|
|BSU25120||yqfT||hypothetical protein (RefSeq)||239, 280|
|BSU26050||yqdB||hypothetical protein; skin element (NCBI)||163, 255|
|BSU26120||yqbG||conserved hypothetical protein; skin element (RefSeq)||96, 239|
|BSU26940||yraH||putative lyase (RefSeq)||86, 239|
|BSU27100||yrhP||putative efflux transporter (RefSeq)||199, 255|
|BSU27370||yrrL||hypothetical protein (RefSeq)||13, 255|
|BSU27570||yrzK||hypothetical protein (RefSeq)||150, 239|
|BSU27670||spoVB||putative putative translocase with flippase function for teichoic acid synthesis; involved in spore cortex synthesis (stage V sporulation) (RefSeq)||127, 239|
|BSU29910||ytzH||hypothetical protein (RefSeq)||127, 239|
|BSU29930||amyX||pullulanase (RefSeq)||255, 313|
|BSU29940||ytlR||putative phospholipid kinase (RefSeq)||255, 313|
|BSU31740||yuxH||putative phosphodiesterase (RefSeq)||247, 255|
|BSU32050||yuiE||leucyl aminopeptidase (RefSeq)||80, 255|
|BSU32270||yutH||spore coat-associated protein (RefSeq)||127, 239|
|BSU32280||yutG||putative phosphatidylglycerophosphatase A (RefSeq)||27, 239|
|BSU32290||yutF||putative p-nitrophenyl phosphatase (RefSeq)||213, 255|
|BSU32300||yutE||hypothetical protein (RefSeq)||247, 255|
|BSU32310||yutD||hypothetical protein (RefSeq)||247, 255|
|BSU32320||yutC||putative lipoprotein (RefSeq)||239, 255|
|BSU33360||yvgJ||putative exported enzyme and transporter (RefSeq)||219, 255|
|BSU33970||araR||transcriptional repressor of the ara regulon (LacI family) (RefSeq)||23, 255|
|BSU35770||tagC||putative polyglycerol phosphate assembly and export protein (teichoic acid biosynthesis) (RefSeq)||239, 307|
|BSU36090||ywrE||hypothetical protein (RefSeq)||166, 239|
|BSU38800||yxkH||putative exported polysaccharide deacetylase, lipoprotein (RefSeq)||96, 239|
|BSU40830||yyaK||putative integral inner membrane protein (RefSeq)||187, 255|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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