Organism : Bacillus subtilis | Module List :
Regulation information for BSU27570(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BSU27570
|Gene||Common Name||Description||Module membership|
|BSU00080||yaaC||hypothetical protein (RefSeq)||105, 150|
|BSU00090||guaB||inosine 5'-monophosphate dehydrogenase (RefSeq)||42, 150|
|BSU00730||cysK||cysteine synthase (RefSeq)||80, 150|
|BSU03240||ycgQ||hypothetical protein (RefSeq)||150, 233|
|BSU05380||ydfE||putative flavoprotein (RefSeq)||174, 239|
|BSU06020||groES||co-chaperonin GroES (RefSeq)||39, 150|
|BSU06030||groEL||chaperonin GroEL (RefSeq)||39, 150|
|BSU06120||ydjB||hypothetical protein (RefSeq)||150, 409|
|BSU09080||yhcH||putative ABC transporter (ATP-binding protein) (RefSeq)||150, 233|
|BSU11030||yitL||putative RNA-binding protein (RefSeq)||150, 247|
|BSU12460||xlyB||N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein (RefSeq)||239, 306|
|BSU12680||xkdO||conserved hypothetical protein; PBSX phage protein (RefSeq)||239, 269|
|BSU12710||xkdR||conserved hypothetical protein; putative PBSX prophage protein (RefSeq)||239, 269|
|BSU12790||xhlA||defective prophage PBSX putative enzyme (RefSeq)||7, 239|
|BSU13250||ykoG||two-component response regulator [YkoH] (RefSeq)||146, 150|
|BSU13260||ykoH||two-component sensor histidine kinase [YkoG] (RefSeq)||146, 150|
|BSU13270||ykoI||hypothetical protein (RefSeq)||146, 150|
|BSU13480||ykrK||hypothetical protein (RefSeq)||150, 239|
|BSU14310||moaD||molybdopterin synthase (small subunit) (RefSeq)||128, 150|
|BSU14750||ylaE||hypothetical protein (RefSeq)||239, 353|
|BSU14800||ylaJ||putative lipoprotein (RefSeq)||239, 263|
|BSU18300||ppsE||plipastatin synthetase (RefSeq)||98, 150|
|BSU18600||yozQ||hypothetical protein (RefSeq)||55, 239|
|BSU18660||yoaM||hypothetical protein (RefSeq)||19, 150|
|BSU18760||yoaU||putative transcriptional regulator (LysR family) (RefSeq)||200, 239|
|BSU18800||penP||beta-lactamase precursor (RefSeq)||150, 274|
|BSU18920||phrK||secreted regulator of the activity of phosphatase RapK (RefSeq)||239, 291|
|BSU19090||yobU||putative effector of transcriptional regulator (RefSeq)||64, 239|
|BSU19400||sodC||superoxide dismutase (exported lipoprotein) (RefSeq)||239, 359|
|BSU19410||cwlS||peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase) (RefSeq)||239, 353|
|BSU22000||sspL||small acid-soluble spore protein (RefSeq)||200, 239|
|BSU22140||kduD||2-deoxy-D-gluconate 3-dehydrogenase (RefSeq)||150, 168|
|BSU24590||yqhG||hypothetical protein (RefSeq)||239, 411|
|BSU25060||yqfZ||factor involved in motility (RefSeq)||123, 239|
|BSU25120||yqfT||hypothetical protein (RefSeq)||239, 280|
|BSU25420||yqeW||putative Na+/anion cotransporter (RefSeq)||86, 150|
|BSU26120||yqbG||conserved hypothetical protein; skin element (RefSeq)||96, 239|
|BSU26940||yraH||putative lyase (RefSeq)||86, 239|
|BSU27250||yrhB||cystathionine beta-lyase (RefSeq)||80, 150|
|BSU27260||mccA||cystathionine beta-synthase for the reverse transsulfuration pathway (RefSeq)||80, 150|
|BSU27280||yrrT||putative AdoMet-dependent methyltransferase (RefSeq)||150, 195|
|BSU27570||yrzK||hypothetical protein (RefSeq)||150, 239|
|BSU27670||spoVB||putative putative translocase with flippase function for teichoic acid synthesis; involved in spore cortex synthesis (stage V sporulation) (RefSeq)||127, 239|
|BSU29400||ytlI||transcriptional regulator (LysR family) (RefSeq)||150, 333|
|BSU29910||ytzH||hypothetical protein (RefSeq)||127, 239|
|BSU31460||kapB||factor required for KinB signal transduction and activation of the phosphorelay to sporulation (RefSeq)||145, 150|
|BSU32270||yutH||spore coat-associated protein (RefSeq)||127, 239|
|BSU32280||yutG||putative phosphatidylglycerophosphatase A (RefSeq)||27, 239|
|BSU32320||yutC||putative lipoprotein (RefSeq)||239, 255|
|BSU35770||tagC||putative polyglycerol phosphate assembly and export protein (teichoic acid biosynthesis) (RefSeq)||239, 307|
|BSU36090||ywrE||hypothetical protein (RefSeq)||166, 239|
|BSU38340||ywbF||putative sugar permease (RefSeq)||19, 150|
|BSU38800||yxkH||putative exported polysaccharide deacetylase, lipoprotein (RefSeq)||96, 239|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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If the gene is a member of a module, regulators influencing that module are also considered to regulate the gene. Regulators table list total number of regulatory influences, regulators, modules and type of the influence.
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- 1. All genomic elements for the organism are represented as a circle and each element is separated by black tick marks. In this example chromosome and pDV represent main chromosome and plasmid for D. vulgaris Hildenborough, respectively.
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