Organism : Bacillus subtilis | Module List :
Regulation information for BSU25120(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BSU25120
|Gene||Common Name||Description||Module membership|
|BSU00430||yabG||sporulation-specific protease (RefSeq)||280, 281|
|BSU05380||ydfE||putative flavoprotein (RefSeq)||174, 239|
|BSU12460||xlyB||N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein (RefSeq)||239, 306|
|BSU12680||xkdO||conserved hypothetical protein; PBSX phage protein (RefSeq)||239, 269|
|BSU12710||xkdR||conserved hypothetical protein; putative PBSX prophage protein (RefSeq)||239, 269|
|BSU12790||xhlA||defective prophage PBSX putative enzyme (RefSeq)||7, 239|
|BSU13480||ykrK||hypothetical protein (RefSeq)||150, 239|
|BSU14250||yknT||hypothetical protein (RefSeq)||224, 280|
|BSU14750||ylaE||hypothetical protein (RefSeq)||239, 353|
|BSU14800||ylaJ||putative lipoprotein (RefSeq)||239, 263|
|BSU14970||ylbD||hypothetical protein (RefSeq)||280, 281|
|BSU14980||ylbE||hypothetical protein (RefSeq)||99, 280|
|BSU15030||ylbJ||putative factor required for spore cortex formation (RefSeq)||16, 280|
|BSU15810||spoVM||stage V sporulation protein M (RefSeq)||280, 286|
|BSU18280||yngK||hypothetical protein (RefSeq)||174, 280|
|BSU18600||yozQ||hypothetical protein (RefSeq)||55, 239|
|BSU18760||yoaU||putative transcriptional regulator (LysR family) (RefSeq)||200, 239|
|BSU18920||phrK||secreted regulator of the activity of phosphatase RapK (RefSeq)||239, 291|
|BSU19090||yobU||putative effector of transcriptional regulator (RefSeq)||64, 239|
|BSU19400||sodC||superoxide dismutase (exported lipoprotein) (RefSeq)||239, 359|
|BSU19410||cwlS||peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase) (RefSeq)||239, 353|
|BSU19600||yodH||putative S-adenosylmethionine-dependent methyltransferase (RefSeq)||280, 411|
|BSU19610||yodI||hypothetical protein (RefSeq)||280, 281|
|BSU19670||yodN||hypothetical protein (RefSeq)||280, 281|
|BSU22000||sspL||small acid-soluble spore protein (RefSeq)||200, 239|
|BSU22240||ypqA||hypothetical protein (RefSeq)||21, 280|
|BSU23350||ypzD||hypothetical protein (RefSeq)||280, 281|
|BSU24590||yqhG||hypothetical protein (RefSeq)||239, 411|
|BSU25060||yqfZ||factor involved in motility (RefSeq)||123, 239|
|BSU25120||yqfT||hypothetical protein (RefSeq)||239, 280|
|BSU25350||yqfD||stage IV sporulation protein (RefSeq)||16, 280|
|BSU25360||yqfC||hypothetical protein (RefSeq)||162, 280|
|BSU26120||yqbG||conserved hypothetical protein; skin element (RefSeq)||96, 239|
|BSU26740||cypA||cytochrome P450 (RefSeq)||280, 307|
|BSU26940||yraH||putative lyase (RefSeq)||86, 239|
|BSU27570||yrzK||hypothetical protein (RefSeq)||150, 239|
|BSU27670||spoVB||putative putative translocase with flippase function for teichoic acid synthesis; involved in spore cortex synthesis (stage V sporulation) (RefSeq)||127, 239|
|BSU28110||spoVID||morphogenetic spore protein (stage VI sporulation) (RefSeq)||224, 280|
|BSU29240||ytrI||protein involved in sporulation (RefSeq)||280, 286|
|BSU29910||ytzH||hypothetical protein (RefSeq)||127, 239|
|BSU31140||cdoA||cysteine dioxygenase (RefSeq)||183, 280|
|BSU31290||yugT||putative oligo-1,6-glucosidase (RefSeq)||126, 280|
|BSU32270||yutH||spore coat-associated protein (RefSeq)||127, 239|
|BSU32280||yutG||putative phosphatidylglycerophosphatase A (RefSeq)||27, 239|
|BSU32320||yutC||putative lipoprotein (RefSeq)||239, 255|
|BSU32650||yurS||hypothetical protein (RefSeq)||280, 307|
|BSU35770||tagC||putative polyglycerol phosphate assembly and export protein (teichoic acid biosynthesis) (RefSeq)||239, 307|
|BSU36090||ywrE||hypothetical protein (RefSeq)||166, 239|
|BSU38800||yxkH||putative exported polysaccharide deacetylase, lipoprotein (RefSeq)||96, 239|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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