Rv1990c

Rv1990c () is predicted to be co-regulated in modules bicluster_0220 with residual 0.49 and bicluster_0397 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 9.80 and 4,900.00 for bicluster_0220 and 0.00 and 0.00 for bicluster_0397 respectively.

These modules are enriched for following go terms: nitrogen compound metabolic process, carbon-oxygen lyase activity.

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 51 - 60 of 122
Gene Target Differential Expression Distance Expression pvalue Type
Ribonuclease PH (EC 2.7.7.56)
No -128 0.01 0.986374 Primary.TSS
Cyclohexanone monooxygenase (EC 1.14.13.22)
No 61 -0.48 0.378517 Antisense.TSS
Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)
No -70 -0.27 0.344426 CDS
metallo-beta-lactamase superfamily protein
No -72 -0.24 0.446571 CDS
Excinuclease ABC subunit A
No -121 0.12 0.56179 CDS
Glutaryl-7-ACA acylase
No 66 -0.33 0.519394 Antisense.TSS
Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
No -138 0.12 0.919844 CDS
Uncharacterized protein conserved in bacteria
No -89 -0.45 0.37716 Internal.TSS
Uncharacterized protein conserved in bacteria
No -149 -0.45 0.37716 CDS
Oxidoreductase, short-chain dehydrogenase/reductase family
No -48 -0.72 0.158142 CDS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA