Rv1990c

Rv1990c () is predicted to be co-regulated in modules bicluster_0220 with residual 0.49 and bicluster_0397 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 9.80 and 4,900.00 for bicluster_0220 and 0.00 and 0.00 for bicluster_0397 respectively.

These modules are enriched for following go terms: nitrogen compound metabolic process, carbon-oxygen lyase activity.

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 71 - 80 of 122
Gene Target Differential Expression Distance Expression pvalue Type
Repressed -58 -0.79 0.00837361 Primary.TSS
Possible membrane protein
No -133 -0.19 0.133859 CDS
Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52)
No -36 0.02 0.967153 Internal.TSS
No -59 -0.69 0.121406 Primary.TSS
Repressed -64 -0.94 0.000283304 Primary.TSS
Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly
No -83 -0.61 0.0974538 Primary.TSS
PE-PGRS FAMILY PROTEIN
No 11 0.24 0.843572 CDS
No -124 0.15 0.907635 Antisense.TSS
No 1 0.15 0.907635 CDS
NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase
No -124 -0.38 0.0285438 Primary.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA