Rv1990c

Rv1990c () is predicted to be co-regulated in modules bicluster_0220 with residual 0.49 and bicluster_0397 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 9.80 and 4,900.00 for bicluster_0220 and 0.00 and 0.00 for bicluster_0397 respectively.

These modules are enriched for following go terms: nitrogen compound metabolic process, carbon-oxygen lyase activity.

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 21 - 30 of 122
Gene Target Differential Expression Distance Expression pvalue Type
No -86 0.08 0.937363 CDS
Methoxy mycolic acid synthase 1 MmaA1 (EC 2.1.1.-)
No -74 -0.18 0.812904 CDS
Possible membrane protein
No -132 -0.24 0.453122 Primary.TSS
No 51 0.01 0.987773 CDS
Gamma-glutamyltranspeptidase (EC 2.3.2.2)
No -6 -0.29 0.183921 Internal.TSS
Gamma-glutamyltranspeptidase (EC 2.3.2.2)
No 52 -0.29 0.183921 Antisense.TSS
Transcriptional regulator, TetR family
No 52 -0.24 0.408481 Primary.TSS
putative aminotransferase
No -37 -0.21 0.783336 CDS
3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
No -128 0.01 0.987923 Primary.TSS
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
No -92 -0.34 0.181547 Primary.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA