Rv1990c

Rv1990c () is predicted to be co-regulated in modules bicluster_0220 with residual 0.49 and bicluster_0397 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 9.80 and 4,900.00 for bicluster_0220 and 0.00 and 0.00 for bicluster_0397 respectively.

These modules are enriched for following go terms: nitrogen compound metabolic process, carbon-oxygen lyase activity.

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 41 - 50 of 122
Gene Target Differential Expression Distance Expression pvalue Type
Possible glycosyl hydrolase (EC 3.-.-.-)
No 12 -0.1 0.883684 Primary.TSS
Prevent host death protein, Phd antitoxin
No 40 -0.54 0.205034 CDS
No 65 -0.48 0.0102288 Primary.TSS
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
No -24 -0.52 0.0000000287 Primary.TSS
PE family protein
Repressed -46 -0.94 0.0103325 Primary.TSS
Enoyl-CoA hydratase (EC 4.2.1.17)
No -28 -0.49 0.31026 CDS
No -10 -0.23 0.635946 Primary.TSS
Possible oxidoreductase subunit
Repressed 34 -1 0.00571578 CDS
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
No -40 -0.3 0.279008 CDS
Metal-dependent hydrolases of the beta-lactamase superfamily III
No -128 -0.32 0.1811 Internal.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA