Rv1990c

Rv1990c () is predicted to be co-regulated in modules bicluster_0220 with residual 0.49 and bicluster_0397 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 9.80 and 4,900.00 for bicluster_0220 and 0.00 and 0.00 for bicluster_0397 respectively.

These modules are enriched for following go terms: nitrogen compound metabolic process, carbon-oxygen lyase activity.

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 31 - 40 of 122
Gene Target Differential Expression Distance Expression pvalue Type
LSU ribosomal protein L32p
No 4 -0.01 0.991555 Primary.TSS
Molybdenum cofactor biosynthesis protein MoaB
No -26 -0.01 0.976855 Internal.TSS
Molybdenum cofactor biosynthesis protein MoaB
No 54 -0.01 0.976855 Internal.TSS
5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)
No 21 -0.52 0.0412914 CDS
UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)
No -79 -0.3 0.374254 Primary.TSS
CONSERVED MEMBRANE PROTEIN
No 47 -0.3 0.57502 Primary.TSS
rRNA small subunit methyltransferase I
No 22 -0.25 0.453122 CDS
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Repressed -13 -1.1 0.00849272 CDS
COG1272: Predicted membrane protein hemolysin III homolog
No 52 -0.3 0.191564 Primary.TSS
Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31)
No -18 -0.56 0.0000337 Primary.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA