Rv1990c

Rv1990c () is predicted to be co-regulated in modules bicluster_0220 with residual 0.49 and bicluster_0397 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 9.80 and 4,900.00 for bicluster_0220 and 0.00 and 0.00 for bicluster_0397 respectively.

These modules are enriched for following go terms: nitrogen compound metabolic process, carbon-oxygen lyase activity.

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 11 - 20 of 122
Gene Target Differential Expression Distance Expression pvalue Type
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Repressed -65 -1.11 0.00117096 CDS
Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)
No -32 0.11 0.936811 CDS
Adenylyl cyclase class-3/4/guanylyl cyclase / Disease resistance domain-containing protein / Tetratricopeptide repeat-containing protein / Transcriptional regulator, LuxR family
Repressed -94 -0.75 0.00667954 CDS
No -12 -0.2 0.661641 Primary.TSS
Carbon-nitrogen hydrolase
No 53 0.26 0.55407 Internal.TSS
Putative membrane protein
No -8 -0.33 0.514566 CDS
UPF0234 protein YajQ
No -74 0.07 0.967599 Primary.TSS
Capsule biosynthesis protein CapA
No 69 -0.18 0.772806 Primary.TSS
ATPase
Repressed 22 -0.72 0.0165959 CDS
No -125 0.08 0.937363 Internal.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA