Module_62 |
9
Product:Conserved hypothetical protein | Pathway: | COG:
Product:Fragment of putative topoisomerase (C-terminalregion) | Pathway: | COG: Function unknown
Product:Fragment of transcriptional regulator,beta-lactams repressor (Part 2) | Pathway: | COG: Transcription
Product:Conserved hypothetical protein | Pathway: | COG:
Product:Conserved hypothetical protein | Pathway: | COG:
Product:Transcriptional regulator, MerR family | Pathway: | COG: Transcription
Product:Fragment of putative topoisomerase (C-terminalregion) | Pathway: | COG: Replication, recombination and repair
Product:Putative phosphoesterase | Pathway: | COG: Function unknown
Product:Fragment of phage endolysin CwlH | Pathway: | COG:
|
NA |
|
NA |
|
0.46 |
|
Inferelator: 1
Hypergeometric: 0
TF Influences from Inferelator
Product:Transcriptional regulator, MerR family | Pathway: | COG: Transcription
TF Influences from Hypergeometric Test
No TF Influences from the hypergeometric test
|
Module_30 |
22
Product:Transcriptional regulator, TetR family | Pathway: | COG: Transcription
Product:Bifunctional adenosylcobalamin biosynthesisprotein CobU [Adenosylcobinamide kinase;Adenosylcobinamide-phosphate guanylyltransferase] | Pathway: | COG: Coenzyme transport and metabolism
Product:Transcriptional regulator, GntR family | Pathway: | COG: Transcription
Product:Acetate kinase (Acetokinase) | Pathway: Metabolic intermediate biosynthesis | COG: Energy production and conversion
Product:Pyruvate formate-lyase activating enzyme | Pathway: | COG: Posttranslational modification, protein turnover, chaperones
Product:Two-component sensor histidine kinase | Pathway: | COG: Signal transduction mechanisms
Product:Putative signaling protein | Pathway: | COG: Signal transduction mechanisms
Product:Putative diguanylate kinase signaling protein | Pathway: | COG: Signal transduction mechanisms
Product:Two-component response regulator | Pathway: | COG: Signal transduction mechanisms
Product:Putative diguanylate kinase signaling protein | Pathway: | COG: Signal transduction mechanisms
Product:5-aminoimidazole-4-carboxamide ribonucleotidetransformylase | Pathway: | COG: Nucleotide transport and metabolism
Product:Putative flavodoxin/nitric oxide synthase | Pathway: | COG: Function unknown
Product:Putative signaling protein | Pathway: | COG: Signal transduction mechanisms
Product:Putative acetyltransferase | Pathway: | COG: Transcription
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Putative lipoate-protein ligase | Pathway: Protein modification | COG: Coenzyme transport and metabolism
Product:Two-component sensor histidine kinase,sporulation-associated spo0A | Pathway: | COG: Signal transduction mechanisms
Product:Formate acetyltransferase (Pyruvateformate-lyase) | Pathway: | COG: Energy production and conversion
Product:Putative isomerase/hydrolase | Pathway: | COG: Secondary metabolites biosynthesis, transport and catabolism
Product:Putative diguanylate kinase signaling protein | Pathway: | COG: Signal transduction mechanisms
Product:Diguanylate cyclase protein | Pathway: | COG: Signal transduction mechanisms
Product:Putative endoribonuclease | Pathway: | COG: Translation, ribosomal structure and biogenesis
|
0.000000000000032 |
|
NA |
|
0.46 |
|
Inferelator: 3
Hypergeometric: 0
TF Influences from Inferelator
Product:Transcriptional regulator, LacI family | Pathway: | COG: Transcription
Product:Two-component response regulator | Pathway: | COG: Signal transduction mechanisms
Product:Transcriptional regulator, TetR family | Pathway: | COG: Transcription
TF Influences from Hypergeometric Test
No TF Influences from the hypergeometric test
|
Module_47 |
20
Product:ABC-type transport system, molybdenum-likeATP-binding protein | Pathway: | COG: Carbohydrate transport and metabolism
Product:PTS system, lactose/cellobiose-family IIBcomponent | Pathway: | COG: Carbohydrate transport and metabolism
Product:Cellulose synthase catalytic subunit(UDP-forming) | Pathway: | COG: Cell wall/membrane/envelope biogenesis
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG:
Product:PTS system, lactose/cellobiose-family IICmembrane component | Pathway: | COG: Carbohydrate transport and metabolism
Product:Endoglucanase (cellulase) | Pathway: | COG: Carbohydrate transport and metabolism
Product:ABC-type transport system, molybdenum-likepermease | Pathway: | COG: Inorganic ion transport and metabolism
Product:Maltose-6'-phosphate glucosidase | Pathway: | COG: Carbohydrate transport and metabolism
Product:Transcriptional regulator, AraC family | Pathway: | COG: Transcription
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:ABC-type transport system, molybdenum-likeextracellular solute-binding protein | Pathway: | COG: Inorganic ion transport and metabolism
Product:PTS system, lactose/cellobiose-family IIAcomponent | Pathway: | COG: Carbohydrate transport and metabolism
Product:Putative membrane-bound 0-ACYL transferase, MBOATfamily | Pathway: | COG: Cell wall/membrane/envelope biogenesis
|
0.05 |
|
NA |
|
0.46 |
|
Inferelator: 2
Hypergeometric: 0
TF Influences from Inferelator
Product:Transcriptional regulator, AraC family | Pathway: | COG: Transcription
Product:Transcriptional regulator, sigma-54-dependent | Pathway: | COG: Transcription
TF Influences from Hypergeometric Test
No TF Influences from the hypergeometric test
|
Module_159 |
24
Product:Beta-subunit of electron transfer flavoprotein | Pathway: | COG: Energy production and conversion
Product:Bifunctional carbon monoxidedehydrogenase/acetyl-CoA synthase, subunit alpha/beta | Pathway: | COG: Energy production and conversion
Product:D-lactate dehydrogenase | Pathway: | COG: Energy production and conversion
Product:Formate--tetrahydrofolate ligase(Formyltetrahydrofolate synthetase) (FHS) (FTHFS) | Pathway: One-carbon metabolism | COG: Nucleotide transport and metabolism
Product:Activator of 2-hydroxyisocaproyl-CoA dehydratase | Pathway: | COG: Lipid transport and metabolism
Product:Bifunctional protein folD [Includes:Methylenetetrahydrofolate dehydrogenase ;Methenyltetrahydrofolate cyclohydrolase] | Pathway: One-carbon metabolism | COG: Coenzyme transport and metabolism
Product:Subunit of oxygen-sensitive2-hydroxyisocaproyl-CoA dehydratase C | Pathway: | COG: Amino acid transport and metabolism
Product:Glycine reductase complex component C subunitbeta (Protein PC beta) | Pathway: | COG: Energy production and conversion
Product:Chaperone protein | Pathway: | COG: Posttranslational modification, protein turnover, chaperones
Product:5,10-methylenetetrahydrofolate reductase | Pathway: One-carbon metabolism | COG: Amino acid transport and metabolism
Product:Bifunctional carbon monoxidedehydrogenase/acetyl-CoA synthase, delta subunit | Pathway: | COG: Energy production and conversion
Product:Bifunctional carbon monoxidedehydrogenase/acetyl-CoA synthase,nickel-inserting subunit | Pathway: | COG: Cell cycle control, cell division, chromosome partitioning
Product:Alpha-subunit of electron transfer flavoprotein | Pathway: | COG: Energy production and conversion
Product:Glycine cleavage system H protein | Pathway: | COG: Amino acid transport and metabolism
Product:Isocaprenoyl-CoA:2-hydroxyisocaproateCoA-transferase | Pathway: | COG: Energy production and conversion
Product:Subunit of oxygen-sensitive2-hydroxyisocaproyl-CoA dehydratase B | Pathway: | COG: Amino acid transport and metabolism
Product:Methenyltetrahydrofolate cyclohydrolase(5,10-methenyltetrahydrofolate 5-hydrolase) | Pathway: | COG: Amino acid transport and metabolism
Product:Acyl-CoA dehydrogenase, short-chain specific | Pathway: | COG: Lipid transport and metabolism
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Bifunctional carbon monoxidedehydrogenase/acetyl-CoA synthase, subunit delta | Pathway: | COG: Energy production and conversion
Product:Bifunctional carbon monoxidedehydrogenase/acetyl-CoA synthase, dihydrolipoyldehydrogenase subunit | Pathway: | COG: Energy production and conversion
Product:Bifunctional carbon monoxidedehydrogenase/acetyl-CoA synthase, methyltransferasesubunit | Pathway: | COG: Amino acid transport and metabolism
Product:Glycine reductase complex component C subunitalpha (Protein PC alpha) | Pathway: | COG: Function unknown
|
NA |
|
NA |
|
0.46 |
|
Inferelator: 1
Hypergeometric: 2
TF Influences from Inferelator
Product:Putative dinitrogenase iron-molybdenum cofactor | Pathway: | COG: Function unknown
TF Influences from Hypergeometric Test
Product:Transcriptional regulator, LacI family | Pathway: | COG: Transcription
Product:RNA polymerase sigma-54 factor | Pathway: | COG: Transcription
|
Module_31 |
23
Product:Putative hydrolase | Pathway: | COG: Function unknown
Product:Putative signaling protein | Pathway: | COG: Signal transduction mechanisms
Product:Transcriptional regulator, beta-lactams repressorPhage-type | Pathway: | COG: Transcription
Product:Putative extrachromosomal origin protein | Pathway: | COG: Function unknown
Product:Putative calcium-binding adhesion protein | Pathway: | COG: Function unknown
Product:Chloride ion channel protein | Pathway: | COG: Inorganic ion transport and metabolism
Product:Putative methyltransferase, type 11 family | Pathway: | COG: Secondary metabolites biosynthesis, transport and catabolism
Product:Putative signaling protein | Pathway: | COG: Signal transduction mechanisms
Product:Putative hydrolase, HAD superfamily, IIBsubfamily | Pathway: | COG: Function unknown
Product:Putative bacterioferritin | Pathway: | COG: Inorganic ion transport and metabolism
Product:Putative glycoside hydrolase, family 38; Putativealpha-mannosidase | Pathway: | COG: Carbohydrate transport and metabolism
Product:Putative sodium:phosphate symporter | Pathway: | COG: Inorganic ion transport and metabolism
Product:Alternative RNA polymerase sigma factors | Pathway: | COG:
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Transcriptional regulator, HTH-type | Pathway: | COG: Transcription
Product:signal recognition particle receptor | Pathway: | COG: Intracellular trafficking, secretion, and vesicular transport
Product:Putative carboxy-terminal protease | Pathway: | COG: Cell wall/membrane/envelope biogenesis
Product:Na(+)/H(+) antiporter | Pathway: | COG: Inorganic ion transport and metabolism
Product:Putative diguanylate kinase signaling protein | Pathway: | COG: Signal transduction mechanisms
Product:Holin-like pore-forming protein | Pathway: | COG: Function unknown
Product:Transcriptional regulator, sigma-54-dependent | Pathway: | COG: Transcription
Product:Spore outer coat layer protein CotB | Pathway: | COG: Function unknown
Product:Putative membrane protein | Pathway: | COG: Function unknown
|
5.2e-21 |
|
NA |
|
0.46 |
|
Inferelator: 2
Hypergeometric: 0
TF Influences from Inferelator
Product:RNA polymerase sigma-G factor | Pathway: | COG: Transcription
Product:Stage V sporulation protein T | Pathway: | COG: Transcription
TF Influences from Hypergeometric Test
No TF Influences from the hypergeometric test
|
Module_272 |
29
Product:Putative nucleotide phosphodiesterase | Pathway: | COG: Nucleotide transport and metabolism
Product:Homoserine O-succinyltransferase | Pathway: Amino-acid biosynthesis | COG: Amino acid transport and metabolism
Product:ABC-type transport system, methionine-specificpermease | Pathway: | COG: Inorganic ion transport and metabolism
Product:Dipicolinate synthase subunit B | Pathway: | COG: Coenzyme transport and metabolism
Product:Dimethyladenosine transferase(S-adenosylmethionine-6-N', N'-adenosyl(rRNA)dimethyltransferase) | Pathway: | COG: Translation, ribosomal structure and biogenesis
Product:Conserved hypothetical protein | Pathway: | COG:
Product:Putative thiolase | Pathway: | COG: Lipid transport and metabolism
Product:Putative transporter | Pathway: | COG: Inorganic ion transport and metabolism
Product:Putative AMP-binding protein | Pathway: | COG: Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism
Product:S-adenosylmethionine synthetase | Pathway: Amino-acid biosynthesis | COG: Coenzyme transport and metabolism
Product:Putative Probable D-methionine-bindinglipoprotein | Pathway: | COG: Inorganic ion transport and metabolism
Product:Glutamyl-tRNA synthetase | Pathway: | COG: Translation, ribosomal structure and biogenesis
Product:Putative hydrolase | Pathway: | COG: Function unknown
Product:Glutaminase (L-glutamine amidohydrolase) | Pathway: | COG: Amino acid transport and metabolism
Product:Putative peptidase, S41 family | Pathway: | COG: Function unknown
Product:Transcriptional regulator, MerR family | Pathway: | COG: Transcription
Product:O-acetylhomoserine sulfhydrylase | Pathway: | COG: Amino acid transport and metabolism
Product:Putative CDP-glycerol:Poly(glycerophosphate)glycerophosphotransferase | Pathway: | COG: Function unknown
Product:ABC-type transport system, methionine-specificsubstrate-binding lipoprotein | Pathway: | COG: Inorganic ion transport and metabolism
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Serine-type D-Ala-D-Ala carboxypeptidase | Pathway: | COG: Cell wall/membrane/envelope biogenesis
Product:Dipicolinate synthase subunit A | Pathway: | COG: Function unknown
Product:Putative tellurium resistance protein | Pathway: | COG: Signal transduction mechanisms
Product:Biotin synthase | Pathway: | COG: Function unknown
Product:Putative DNA-binding protein | Pathway: | COG: Replication, recombination and repair
Product:ABC-type transport system, methionine-specificATP-binding protein | Pathway: | COG: Inorganic ion transport and metabolism
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Putative lipoprotein | Pathway: | COG:
Product:Transcriptional regulator, ArsR family | Pathway: | COG: Transcription
|
0.00000077 |
|
0.07 |
|
0.46 |
|
Inferelator: 3
Hypergeometric: 0
TF Influences from Inferelator
Product:Transcriptional regulator, Crp family | Pathway: | COG: Transcription
Product:RNA polymerase sigma-G factor | Pathway: | COG: Transcription
Product:Stage V sporulation protein T | Pathway: | COG: Transcription
TF Influences from Hypergeometric Test
No TF Influences from the hypergeometric test
|
Module_1 |
18
Product:Putative glycosyl transferase, family 2 | Pathway: | COG: Cell wall/membrane/envelope biogenesis
Product:Phosphopentomutase (Phosphodeoxyribomutase) | Pathway: Metabolic intermediate biosynthesis | COG: Carbohydrate transport and metabolism
Product:Putative hydrolase, NUDIX family | Pathway: | COG: Nucleotide transport and metabolism
Product:Pyrimidine-nucleoside phosphorylase | Pathway: | COG: Nucleotide transport and metabolism
Product:Putative signal transduction phosphoesterase | Pathway: | COG: Signal transduction mechanisms
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Purine nucleoside phosphorylase | Pathway: Purine metabolism | COG: Nucleotide transport and metabolism
Product:Putative glycosyl transferase | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Replicative DNA helicase | Pathway: | COG: Replication, recombination and repair
Product:Putative phage integrase site-specificrecombinase XerD-like | Pathway: | COG: Replication, recombination and repair
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Putative pyrophosphokinase, DUF115 family | Pathway: | COG: Function unknown
Product:Putative membrane protein | Pathway: | COG:
Product:30S ribosomal protein S6 | Pathway: | COG: Translation, ribosomal structure and biogenesis
Product:Single-stranded DNA-binding protein(Helix-destabilizing protein) | Pathway: | COG: Replication, recombination and repair
Product:50S ribosomal protein L9 | Pathway: | COG: Translation, ribosomal structure and biogenesis
Product:30S ribosomal protein S18 | Pathway: | COG: Translation, ribosomal structure and biogenesis
|
NA |
|
NA |
|
0.46 |
|
Inferelator: 1
Hypergeometric: 1
TF Influences from Inferelator
Product:Transcriptional regulator, ArsR family | Pathway: | COG: Transcription
TF Influences from Hypergeometric Test
Product:Stage 0 sporulation protein A | Pathway: | COG: Signal transduction mechanisms
|
Module_34 |
6
Product:Conserved hypothetical protein | Pathway: | COG:
Product:Putative oligonucleotide binding regulator | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG:
Product:Putative conjugative transposon proteinTn916-like, CTn6-Orf10 | Pathway: | COG: Function unknown
Product:Putative transcriptional regulator Tn916-like,CTn6-Orf11 | Pathway: | COG: Function unknown
|
NA |
|
NA |
|
0.46 |
|
Inferelator: 3
Hypergeometric: 0
TF Influences from Inferelator
Product:Putative transcriptional regulator | Pathway: | COG: Transcription
Product:Transcriptional regulator, HTH-type | Pathway: | COG: Transcription
Product:Clostridium difficile binary toxin regulatorygene, LytTR family | Pathway: | COG: Signal transduction mechanisms
TF Influences from Hypergeometric Test
No TF Influences from the hypergeometric test
|
Module_84 |
23
Product:Proline reductase (selenocysteine) | Pathway: | COG: Function unknown
Product:Putative FAD-linked oxidase | Pathway: | COG: Energy production and conversion
Product:Electron transfer flavoprotein subunit alpha | Pathway: | COG: Energy production and conversion
Product:Putative phage-related cell wall hydrolase(endolysin) | Pathway: | COG: Cell wall/membrane/envelope biogenesis
Product:Protein translocase subunit SecA1 | Pathway: | COG: Intracellular trafficking, secretion, and vesicular transport
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Putative component of proline reductaseprdE-like | Pathway: | COG: Function unknown
Product:Putative cation efflux protein | Pathway: | COG: Inorganic ion transport and metabolism
Product:Putative ribosome-associated sigma 54 modulationprotein | Pathway: | COG: Translation, ribosomal structure and biogenesis
Product:Protein RecA (Recombinase A) | Pathway: | COG: Replication, recombination and repair
Product:Putative membrane protein | Pathway: | COG: Function unknown
Product:Putative membrane protein | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG:
Product:Proline reductase PrdD | Pathway: | COG: Function unknown
Product:Peptide chain release factor 2 (RF-2) | Pathway: | COG: Translation, ribosomal structure and biogenesis
Product:Putative chaperone protein | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Electron transfer flavoprotein subunit alpha | Pathway: | COG: Energy production and conversion
Product:Putative RNA-binding protein | Pathway: | COG: Translation, ribosomal structure and biogenesis
Product:Proline reductase PrdE | Pathway: | COG: Function unknown
Product:Proline racemase | Pathway: | COG: Amino acid transport and metabolism
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:RNase Y | Pathway: | COG: Function unknown
|
0.00000000000016 |
|
NA |
|
0.46 |
|
Inferelator: 2
Hypergeometric: 3
TF Influences from Inferelator
Product:Transcriptional regulator, DeoR family (Fattyacid and phospholipid biosynthesis regulator) | Pathway: | COG: Transcription
Product:Transcriptional regulator, RpiR family | Pathway: | COG: Transcription
TF Influences from Hypergeometric Test
Product:Transcriptional regulator, sigma-54-dependent | Pathway: | COG: Transcription
Product:Transcriptional regulator, LacI family | Pathway: | COG: Transcription
Product:RNA polymerase sigma-54 factor | Pathway: | COG: Transcription
|
Module_393 |
26
Product:DNA-directed RNA polymerase subunit beta' | Pathway: | COG: Transcription
Product:ABC-type transport system, oligopeptide-familysolute-binding protein | Pathway: | COG: Amino acid transport and metabolism
Product:ABC-type transport system, ATP-binding protein | Pathway: | COG: Amino acid transport and metabolism
Product:D-alanyl transferase DltB, MBOAT family | Pathway: Cell wall biogenesis | COG: Cell wall/membrane/envelope biogenesis
Product:Putative penicillin-binding peptidase BlaR1-like,M56 family | Pathway: | COG: Transcription, Signal transduction mechanisms
Product:D-alanine transferase | Pathway: Cell wall biogenesis | COG: Cell wall/membrane/envelope biogenesis
Product:Putative membrane protein | Pathway: | COG: Function unknown
Product:D-alanine--poly(phosphoribitol) ligase subunit 2(D-alanyl carrier protein) (DCP) | Pathway: Cell wall biogenesis | COG: Cell wall/membrane/envelope biogenesis
Product:tRNA-dihydrouridine synthase | Pathway: | COG: Translation, ribosomal structure and biogenesis
Product:Lysyl-tRNA synthetase (Lysine--tRNA ligase)(LysRS) | Pathway: | COG: Translation, ribosomal structure and biogenesis
Product:Transcriptional regulator, beta-lactamsrepressor | Pathway: | COG: Transcription
Product:Putative metal-dependent phosphohydrolase | Pathway: | COG: Function unknown
Product:ABC-type transport system, ATP-binding protein | Pathway: | COG: Amino acid transport and metabolism, Inorganic ion transport and metabolism
Product:DNA-directed RNA polymerase subunit beta | Pathway: | COG: Transcription
Product:BirA bifunctional protein [Includes: biotinoperon repressor and biotin--[acetyl-CoA-carboxylase]synthetase | Pathway: | COG: Coenzyme transport and metabolism
Product:D-alanine--poly(phosphoribitol) ligase subunit 1 | Pathway: Cell wall biogenesis | COG: Secondary metabolites biosynthesis, transport and catabolism
Product:Putative methyltransferase | Pathway: | COG: Secondary metabolites biosynthesis, transport and catabolism
Product:Putative peptidase | Pathway: | COG: Amino acid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism
Product:Transcription elongation factor greA (Transcriptcleavage factor GreA) | Pathway: | COG: Transcription
Product:Type III pantothenate kinase (Pantothenic acidkinase) (PanK-III) | Pathway: Cofactor biosynthesis | COG: Transcription
Product:Putative UvrABC system protein A 1 (UvrA protein1) (Excinuclease ABC subunit A 1) | Pathway: | COG: Replication, recombination and repair
Product:Putative peptidase, U32 family | Pathway: | COG: Posttranslational modification, protein turnover, chaperones
Product:Putative hydrolase, NUDIX family | Pathway: | COG: Replication, recombination and repair
Product:Putative lipoprotein | Pathway: | COG: Function unknown
Product:Transcriptional regulator, beta-lactamsrepressor | Pathway: | COG: Transcription
Product:ABC-type transport system, oligopeptide-familypermease protein | Pathway: | COG: Inorganic ion transport and metabolism
|
0.0000000000019 |
|
NA |
|
0.46 |
|
Inferelator: 1
Hypergeometric: 1
TF Influences from Inferelator
Product:Transcriptional regulator, beta-lactamsrepressor | Pathway: | COG: Transcription
TF Influences from Hypergeometric Test
Product:Transcriptional regulator, sigma-54-dependent | Pathway: | COG: Transcription
|