Regulatory Modules

Displaying 71 - 80 of 170Desulfovibrio vulgaris Hildenborough
Title Motif 1 Motif 2 Residual Bicluster Genes Selected GO Terms
bicluster_0299 4500 6800 0.44 DVU0442, DVU1970, DVU0185, DVU0443, DVU0445, DVU1105, DVU1414, DVU1503, DVU1721, DVU1967, DVU1968, DVU1969, DVU2168, DVU2171, DVU2173, DVU2187 [protein-PII] uridylyltransferase activi..., uridylyltransferase activity, exonuclease activity, nucleotidyltransferase activity
bicluster_0203 1100 4100 0.44 DVU2062, DVU2218, DVU2424, DVU2517, DVU1385, DVU1431, DVU1836, DVU2295, DVU2906, DVU3132, DVU3142 response to stimulus, cellular response to stimulus, DNA repair, cellular response to DNA damage stimulus, catalytic complex
bicluster_0018 1.5 16000 0.44 DVU0004, DVU0563, DVU0835, DVU0837, DVU0838, DVU0839, DVU0927, DVU0928, DVU1033, DVU1074, DVU1257, DVU1302, DVU1334, DVU1676, DVU1792, DVU1931, DVU2215, DVU2222, DVU2538, DVU2920 nucleic acid metabolic process, cellular macromolecule metabolic process, DNA metabolic process, macromolecule metabolic process, nucleobase-containing compound metabolic...
bicluster_0151 180 3200 0.44 DVU0873, DVU0874, DVU0956, DVU1287, DVU1288, DVU1289, DVU1293, DVU2519, DVU2922, DVU2925, DVU2927, DVU2928, DVU2929, DVU1574, DVU2231, DVU2518, DVU2923, DVU2924, DVU2926 transcription, DNA-templated, RNA biosynthetic process, gene expression, RNA metabolic process, organelle
bicluster_0019 1400 17000 0.44 DVU0367, DVU0444, DVU0486, DVU0609, DVU0892, DVU1884, DVU1982, DVU2828, DVU3152, DVU3169, DVU3354, DVU0447, DVU0964, DVU1962 glutamate metabolic process, dicarboxylic acid metabolic process, cellular amino acid catabolic process, organic acid catabolic process, small molecule catabolic process
bicluster_0339 0.000006 0.19 0.44 DVU0371, DVU0554, DVU0555, DVU0556, DVU0558, DVU0559, DVU0561, DVU0562, DVU0923, DVU1147, DVU1166, DVU1167, DVU1277, DVU1832, DVU2010, DVU2048, DVU2175, DVU2827, DVU3089 DNA integration, carbohydrate metabolic process
bicluster_0329 17000 8700 0.43 DVU0181, DVU0183, DVU0283, DVU0442, DVU1416, DVU1698, DVU1714, DVU2271, DVU2334, DVU2346, DVU2540, DVU2541, DVU2656, DVUA0048, DVUA0057 chemotaxis, taxis, flavin adenine dinucleotide binding
bicluster_0343 0.0013 1.2 0.43 DVU0259, DVU0267, DVU0056, DVU0074, DVU0222, DVU0268, DVU0281, DVU0945, DVU1190, DVU1470, DVU1762, DVU1796, DVU2227, DVU2443, DVU2847, DVU3039, DVU3182, DVU3375 chemotaxis, taxis, locomotion, response to chemical, response to external stimulus
bicluster_0032 5.7 59 0.43 DVU0401, DVU0613, DVU0888, DVU0890, DVU0894, DVU0901, DVU0904, DVU0970, DVU1063, DVU2149, DVU2157, DVU2868, DVUA0151, DVU0426, DVU0892, DVU0906, DVU2539 aromatic amino acid family metabolic pro..., aromatic amino acid family biosynthetic ..., UMP biosynthetic process, pyrimidine ribonucleoside monophosphate ..., pyrimidine ribonucleoside monophosphate ...
bicluster_0100 3 530 0.43 DVU1476, DVU1517, DVU1518, DVU1738, DVU1972, DVU2008, DVU2074, DVU2134, DVU2189, DVU2190, DVU2632, DVU2685, DVU0543, DVU1161, DVU1482, DVU1779, DVU1872, DVU1998, DVU2213, DVU3314 chemotaxis, taxis, sequence-specific DNA binding, DNA binding, nucleic acid binding
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