Regulatory Modules
Displaying 11 - 20 of 170Desulfovibrio vulgaris Hildenborough
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| bicluster_0016 |
0.46 |
120 |
0.48 | DVU0407, DVU0941, DVU1005, DVU1244, DVU1335, DVU1572, DVU1582, DVU1612, DVU1647, DVU1648, DVU1649, DVU1655, DVU1656, DVU1850, DVU1861, DVU1867, DVU2201, DVU2609, DVU2650, DVU2655, DVUA0071, DVU0916, DVU1851 | cytoplasm, intracellular, intracellular part, exopeptidase activity, amino acid binding |
| bicluster_0018 |
1.5 |
16000 |
0.44 | DVU0004, DVU0563, DVU0835, DVU0837, DVU0838, DVU0839, DVU0927, DVU0928, DVU1033, DVU1074, DVU1257, DVU1302, DVU1334, DVU1676, DVU1792, DVU1931, DVU2215, DVU2222, DVU2538, DVU2920 | nucleic acid metabolic process, cellular macromolecule metabolic process, DNA metabolic process, macromolecule metabolic process, nucleobase-containing compound metabolic... |
| bicluster_0019 |
1400 |
17000 |
0.44 | DVU0367, DVU0444, DVU0486, DVU0609, DVU0892, DVU1884, DVU1982, DVU2828, DVU3152, DVU3169, DVU3354, DVU0447, DVU0964, DVU1962 | glutamate metabolic process, dicarboxylic acid metabolic process, cellular amino acid catabolic process, organic acid catabolic process, small molecule catabolic process |
| bicluster_0020 |
0.003 |
1 |
0.46 | DVU1542, DVU1543, DVU1565, DVU2624, DVU2646, DVU2647, DVU2702, DVU2703, DVU2719, DVU2720, DVU2721, DVU2722, DVU2723, DVU2724, DVU2727, DVU2728, DVU2729 | deaminase activity |
| bicluster_0021 |
94 |
18000 |
0.32 | DVU0887, DVU1122, DVU1490, DVU1696, DVU1712, DVU1757, DVU2165, DVU2186, DVU2262, DVU2344 | hydrolase activity, acting on glycosyl b... |
| bicluster_0022 |
0.00014 |
8.7 |
0.48 | DVU0043, DVU0307, DVU0309, DVU0318, DVU0320, DVU0325, DVU0409, DVU0410, DVU0518, DVU0520, DVU0862, DVU0863, DVU1441, DVU1443, DVU1444, DVU1805, DVU1963, DVU2065, DVU2991, DVU3001, DVU3002, DVU3004, DVU3005, DVU3006, DVU3014, DVU3232 | cellular component assembly, cellular component biogenesis, cellular component organization, cellular component organization or bioge..., single-organism cellular process |
| bicluster_0023 |
17 |
6.5 |
0.47 | DVU0348, DVU0487, DVU0646, DVU0647, DVU0648, DVU0649, DVU0650, DVU0843, DVU0988, DVU0990, DVU0991, DVU1039, DVU1040, DVU1927, DVU1929, DVU1930, DVU2322, DVU2463, DVU2464, DVU3023, DVU3154, DVU3161, DVU3168, DVU3198, DVU3199, DVU3200, DVU0084 | small molecule metabolic process, cellular nitrogen compound metabolic pro..., cellular aromatic compound metabolic pro..., heterocycle metabolic process, organic cyclic compound metabolic proces... |
| bicluster_0024 |
1700 |
11000 |
0.38 | DVU1106, DVU1114, DVU1116, DVU1118, DVU1120, DVU1125, DVU1130, DVU1132, DVU1133, DVU1135, DVU1137, DVU1138, DVU1140, DVU1143 | DNA binding, nucleic acid binding |
| bicluster_0029 |
0.67 |
32000 |
0.50 | DVU0002, DVU0003, DVU0237, DVU0279, DVU0502, DVU0809, DVU0810, DVU1195, DVU1248, DVU1576, DVU1584, DVU1661, DVU1666, DVU1889, DVU1893, DVU2339, DVU3275, DVU3307, DVU3395, DVU0004, DVU0161, DVU0162, DVU1062 | carbohydrate derivative biosynthetic pro..., organophosphate biosynthetic process, carbohydrate derivative metabolic proces..., phosphate-containing compound metabolic ..., organophosphate metabolic process |
| bicluster_0032 |
5.7 |
59 |
0.43 | DVU0401, DVU0613, DVU0888, DVU0890, DVU0894, DVU0901, DVU0904, DVU0970, DVU1063, DVU2149, DVU2157, DVU2868, DVUA0151, DVU0426, DVU0892, DVU0906, DVU2539 | aromatic amino acid family metabolic pro..., aromatic amino acid family biosynthetic ..., UMP biosynthetic process, pyrimidine ribonucleoside monophosphate ..., pyrimidine ribonucleoside monophosphate ... |
